RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TMEM97Q5BJF2 176 aa14.93□□□□□ -0.02
PTPN4-207ENST00000460162 TRAV1-1A0A0B4J248 108 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 MUC21A0A0G2JKD1 596 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 MUC21A0A140T8X8 626 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 F5H697 171 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 SMIM17P0DL12 118 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 LINC00528Q8N1L1 170 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 DERL1Q9BUN8 251 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 GNG13Q9P2W3 67 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 VAX2Q9UIW0 290 aa14.92□□□□□ -0.02
PTPN4-207ENST00000460162 LINC01620Q4KN68 170 aa14.91□□□□□ -0.02
PTPN4-207ENST00000460162 C14orf177Q52M58 125 aa14.91□□□□□ -0.02
PTPN4-207ENST00000460162 C15orf54Q8N8G6 183 aa14.91□□□□□ -0.02
PTPN4-207ENST00000460162 KIF25-AS1Q9Y6Z4 181 aa14.91□□□□□ -0.02
PTPN4-207ENST00000460162 RAB5CP51148 216 aa14.9□□□□□ -0.02
PTPN4-207ENST00000460162 CENPWQ5EE01 88 aa14.9□□□□□ -0.02
PTPN4-207ENST00000460162 ENHOQ6UWT2 76 aa14.9□□□□□ -0.02
PTPN4-207ENST00000460162 SCXQ7RTU7 201 aa14.9□□□□□ -0.02
PTPN4-207ENST00000460162 CHCHD5Q9BSY4 110 aa14.9□□□□□ -0.02
PTPN4-207ENST00000460162 ANGP03950 147 aaKnown RBP14.89□□□□□ -0.03
PTPN4-207ENST00000460162 EIF5AL1Q6IS14 154 aaKnown RBP14.89□□□□□ -0.03
PTPN4-207ENST00000460162 SMIM12Q96EX1 92 aa14.89□□□□□ -0.03
PTPN4-207ENST00000460162 TEX46H3BTG2 121 aa14.88□□□□□ -0.03
PTPN4-207ENST00000460162 IGLC6P0CF74 106 aa14.88□□□□□ -0.03
PTPN4-207ENST00000460162 RPS20P60866 119 aaKnown RBP14.88□□□□□ -0.03
PTPN4-207ENST00000460162 CCL20P78556 96 aa14.88□□□□□ -0.03
PTPN4-207ENST00000460162 SSTP61278 116 aa14.87□□□□□ -0.03
PTPN4-207ENST00000460162 MIAQ16674 131 aa14.87□□□□□ -0.03
PTPN4-207ENST00000460162 NTM-AS1Q6ZSK4 140 aa14.87□□□□□ -0.03
PTPN4-207ENST00000460162 IGLV2-8P01709 118 aa14.86□□□□□ -0.03
PTPN4-207ENST00000460162 FER1L6-AS1Q8NA97 138 aa14.86□□□□□ -0.03
PTPN4-207ENST00000460162 DAZAP1Q96EP5 407 aaKnown RBP14.86□□□□□ -0.03
PTPN4-207ENST00000460162 CHAC1Q9BUX1 264 aa14.86□□□□□ -0.03
PTPN4-207ENST00000460162 TRBV25-1A0A075B6N4 114 aa14.85□□□□□ -0.03
PTPN4-207ENST00000460162 C19orf71A6NCJ1 209 aa14.85□□□□□ -0.03
PTPN4-207ENST00000460162 H7C1H1 209 aa14.85□□□□□ -0.03
PTPN4-207ENST00000460162 GNG4P50150 75 aa14.85□□□□□ -0.03
PTPN4-207ENST00000460162 MEF2BQ02080 365 aaPredicted RBP14.85□□□□□ -0.03
PTPN4-207ENST00000460162 OR2D3Q8NGH3 330 aa14.85□□□□□ -0.03
PTPN4-207ENST00000460162 TPPP3Q9BW30 176 aa14.85□□□□□ -0.03
PTPN4-207ENST00000460162 PDE6DO43924 150 aa14.84□□□□□ -0.03
PTPN4-207ENST00000460162 MGPP08493 103 aa14.84□□□□□ -0.03
PTPN4-207ENST00000460162 GZMBP10144 247 aa14.84□□□□□ -0.03
PTPN4-207ENST00000460162 SULT1A2P50226 295 aa14.84□□□□□ -0.03
PTPN4-207ENST00000460162 CACNG7P62955 275 aa14.84□□□□□ -0.03
PTPN4-207ENST00000460162 PRR34Q9NV39 138 aa14.84□□□□□ -0.03
PTPN4-207ENST00000460162 XKRY2A2RUG3 117 aa14.83□□□□□ -0.04
PTPN4-207ENST00000460162 M0QY20 66 aa14.83□□□□□ -0.04
PTPN4-207ENST00000460162 IFNA1P01562 189 aa14.83□□□□□ -0.04
PTPN4-207ENST00000460162 HLA-DQA1P01909 254 aa14.83□□□□□ -0.04
PTPN4-207ENST00000460162 IQCJQ1A5X6 159 aa14.83□□□□□ -0.04
PTPN4-207ENST00000460162 USP17L23D6RBM5 183 aa14.82□□□□□ -0.04
PTPN4-207ENST00000460162 RBX1P62877 108 aa14.82□□□□□ -0.04
PTPN4-207ENST00000460162 DEFB104AQ8WTQ1 72 aa14.82□□□□□ -0.04
PTPN4-207ENST00000460162 IGHV1-24A0A0C4DH33 117 aa14.81□□□□□ -0.04
PTPN4-207ENST00000460162 F2Z2F3 143 aa14.81□□□□□ -0.04
PTPN4-207ENST00000460162 P01737 135 aa14.81□□□□□ -0.04
PTPN4-207ENST00000460162 SUMO4Q6EEV6 95 aa14.81□□□□□ -0.04
PTPN4-207ENST00000460162 CIRBP-AS1Q8TBR5 109 aa14.81□□□□□ -0.04
PTPN4-207ENST00000460162 BIN3Q9NQY0 253 aa14.81□□□□□ -0.04
PTPN4-207ENST00000460162 RAB19A4D1S5 217 aa14.8□□□□□ -0.04
PTPN4-207ENST00000460162 J3QL48 77 aa14.8□□□□□ -0.04
PTPN4-207ENST00000460162 BCL2P10415 239 aa14.8□□□□□ -0.04
PTPN4-207ENST00000460162 GAGE6Q13070 117 aa14.8□□□□□ -0.04
PTPN4-207ENST00000460162 TRBV20OR9-2A0A075B6H5 130 aa14.79□□□□□ -0.04
PTPN4-207ENST00000460162 TRGC1P0CF51 173 aa14.79□□□□□ -0.04
PTPN4-207ENST00000460162 CLPSL2Q6UWE3 100 aa14.79□□□□□ -0.04
PTPN4-207ENST00000460162 TCTE3Q8IZS6 198 aa14.78□□□□□ -0.04
PTPN4-207ENST00000460162 LINC00269Q8N2A0 174 aa14.78□□□□□ -0.04
PTPN4-207ENST00000460162 MED9Q9NWA0 146 aa14.78□□□□□ -0.04
PTPN4-207ENST00000460162 RASL11AQ6T310 242 aa14.77□□□□□ -0.05
PTPN4-207ENST00000460162 DPH3P1Q9H4G8 78 aa14.77□□□□□ -0.05
PTPN4-207ENST00000460162 KRTAP29-1A8MX34 341 aaPredicted RBP14.76□□□□□ -0.05
PTPN4-207ENST00000460162 TAGLN2P37802 199 aaKnown RBP14.76□□□□□ -0.05
PTPN4-207ENST00000460162 CTRLP40313 264 aa14.76□□□□□ -0.05
PTPN4-207ENST00000460162 NKX2-5P52952 324 aaPredicted RBP14.76□□□□□ -0.05
PTPN4-207ENST00000460162 KRTAP26-1Q6PEX3 210 aa14.76□□□□□ -0.05
PTPN4-207ENST00000460162 SLC51BQ86UW2 128 aa14.76□□□□□ -0.05
PTPN4-207ENST00000460162 PGLYRP4Q96LB8 373 aa14.76□□□□□ -0.05
PTPN4-207ENST00000460162 PRSS1P07477 247 aa14.75□□□□□ -0.05
PTPN4-207ENST00000460162 KRTAP10-4P60372 401 aaPredicted RBP14.75□□□□□ -0.05
PTPN4-207ENST00000460162 REG3AQ06141 175 aa14.75□□□□□ -0.05
PTPN4-207ENST00000460162 DGAT2L7PQ6IED9 249 aa14.75□□□□□ -0.05
PTPN4-207ENST00000460162 LYZL1Q6UWQ5 148 aa14.75□□□□□ -0.05
PTPN4-207ENST00000460162 TMEM243Q9BU79 118 aa14.74□□□□□ -0.05
PTPN4-207ENST00000460162 A0A1B0GUV1 79 aa14.73□□□□□ -0.05
PTPN4-207ENST00000460162 WDR73Q6P4I2 378 aa14.73□□□□□ -0.05
PTPN4-207ENST00000460162 C9orf62Q8N4C0 152 aa14.73□□□□□ -0.05
PTPN4-207ENST00000460162 CNFNQ9BYD5 112 aa14.73□□□□□ -0.05
PTPN4-207ENST00000460162 NIT2Q9NQR4 276 aa14.73□□□□□ -0.05
PTPN4-207ENST00000460162 NTF3P20783 257 aa14.72□□□□□ -0.05
PTPN4-207ENST00000460162 C9orf163Q8N9P6 203 aa14.72□□□□□ -0.05
PTPN4-207ENST00000460162 C20orf203Q8NBC4 194 aa14.72□□□□□ -0.05
PTPN4-207ENST00000460162 TRAV8-4A0A0B4J246 113 aa14.71□□□□□ -0.05
PTPN4-207ENST00000460162 CLRN3Q8NCR9 226 aa14.71□□□□□ -0.05
PTPN4-207ENST00000460162 NUDT10Q8NFP7 164 aa14.71□□□□□ -0.05
PTPN4-207ENST00000460162 NUDT11Q96G61 164 aa14.71□□□□□ -0.05
PTPN4-207ENST00000460162 RPP21Q9H633 154 aaKnown RBP14.7□□□□□ -0.06
PTPN4-207ENST00000460162 IGLV10-54A0A075B6I4 117 aa14.69□□□□□ -0.06
PTPN4-207ENST00000460162 IGLV4-60A0A075B6I1 120 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms