RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 XKRY2A2RUG3 117 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 IGLC6P0CF74 106 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 SMIM17P0DL12 118 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 Q8N3U1 123 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
COL7A1-203ENST00000459756 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
COL7A1-203ENST00000459756 TRAV8-3A0A0A6YYJ7 113 aa10.78□□□□□ -0.68
COL7A1-203ENST00000459756 F5H697 171 aa10.78□□□□□ -0.68
COL7A1-203ENST00000459756 GATCO43716 136 aaKnown RBP10.78□□□□□ -0.68
COL7A1-203ENST00000459756 ADIRFQ15847 76 aa10.78□□□□□ -0.68
COL7A1-203ENST00000459756 TMEM241Q24JQ0 296 aa10.78□□□□□ -0.68
COL7A1-203ENST00000459756 DAZ4Q86SG3 579 aaKnown RBP10.78□□□□□ -0.68
COL7A1-203ENST00000459756 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
COL7A1-203ENST00000459756 DAZ3Q9NR90 486 aaKnown RBP10.78□□□□□ -0.68
COL7A1-203ENST00000459756 KIF25-AS1Q9Y6Z4 181 aa10.78□□□□□ -0.68
COL7A1-203ENST00000459756 LRCOL1A6NCL2 159 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 F2Z2F3 143 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL7A1-203ENST00000459756 CACNG7P62955 275 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 NIT1Q86X76 327 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 MAPKAPK5-AS1Q8N8E1 139 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 NEXN-AS1Q8NBZ9 246 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 NAT8Q9UHE5 227 aa10.77□□□□□ -0.69
COL7A1-203ENST00000459756 RPL23P62829 140 aaKnown RBP10.76□□□□□ -0.69
COL7A1-203ENST00000459756 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
COL7A1-203ENST00000459756 CHCHD7Q9BUK0 85 aa10.76□□□□□ -0.69
COL7A1-203ENST00000459756 A0A087WX48 190 aa10.75□□□□□ -0.69
COL7A1-203ENST00000459756 KCNIP4Q6PIL6 250 aa10.75□□□□□ -0.69
COL7A1-203ENST00000459756 TRBV6-8A0A0A6YYG3 113 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 ELOBQ15370 118 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 FAM231DQ6ZW35 169 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 COMMD7Q86VX2 200 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 NTN5Q8WTR8 489 aaPredicted RBP10.74□□□□□ -0.69
COL7A1-203ENST00000459756 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 COX11Q9Y6N1 276 aa10.74□□□□□ -0.69
COL7A1-203ENST00000459756 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
COL7A1-203ENST00000459756 Q8N814 137 aa10.73□□□□□ -0.69
COL7A1-203ENST00000459756 C15orf54Q8N8G6 183 aa10.73□□□□□ -0.69
COL7A1-203ENST00000459756 RMI2Q96E14 147 aa10.73□□□□□ -0.69
COL7A1-203ENST00000459756 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 H7C1H1 209 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 MGPP08493 103 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 TRGC1P0CF51 173 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 GCSHP23434 173 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 CTRLP40313 264 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 WDR73Q6P4I2 378 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 Q8N1X5 172 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 KRTAP4-5Q9BYR2 181 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
COL7A1-203ENST00000459756 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 M0QY20 66 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 KRTAP10-1P60331 282 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 PKIAP61925 76 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 PGLYRP4Q96LB8 373 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 OSTCQ9NRP0 149 aa10.71□□□□□ -0.69
COL7A1-203ENST00000459756 A8MWL6 223 aa10.7□□□□□ -0.7
COL7A1-203ENST00000459756 TMEM262E9PQX1 116 aa10.7□□□□□ -0.7
COL7A1-203ENST00000459756 NTF3P20783 257 aa10.7□□□□□ -0.7
COL7A1-203ENST00000459756 TWIST1Q15672 202 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 SUMO4Q6EEV6 95 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 UQCC3Q6UW78 93 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 V9GYV3 84 aa10.69□□□□□ -0.7
COL7A1-203ENST00000459756 F8W036 122 aa10.68□□□□□ -0.7
COL7A1-203ENST00000459756 Q0VG73 95 aa10.68□□□□□ -0.7
COL7A1-203ENST00000459756 CT83Q5H943 113 aa10.68□□□□□ -0.7
COL7A1-203ENST00000459756 NTM-AS1Q6ZSK4 140 aa10.68□□□□□ -0.7
COL7A1-203ENST00000459756 TSKUQ8WUA8 353 aa10.68□□□□□ -0.7
COL7A1-203ENST00000459756 BORCS7Q96B45 105 aa10.68□□□□□ -0.7
COL7A1-203ENST00000459756 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
COL7A1-203ENST00000459756 IGKV2D-24A0A075B6R9 120 aa10.67□□□□□ -0.7
COL7A1-203ENST00000459756 MPV17L2Q567V2 206 aa10.67□□□□□ -0.7
COL7A1-203ENST00000459756 RASL11AQ6T310 242 aa10.67□□□□□ -0.7
COL7A1-203ENST00000459756 ATRAIDQ6UW56 229 aa10.67□□□□□ -0.7
COL7A1-203ENST00000459756 TMEM218A2RU14 115 aa10.66□□□□□ -0.7
COL7A1-203ENST00000459756 LINC00862A6NCI5 91 aa10.66□□□□□ -0.7
COL7A1-203ENST00000459756 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
COL7A1-203ENST00000459756 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
COL7A1-203ENST00000459756 XGP55808 180 aa10.66□□□□□ -0.7
COL7A1-203ENST00000459756 WFDC2Q14508 124 aa10.66□□□□□ -0.7
COL7A1-203ENST00000459756 LECT2O14960 151 aa10.65□□□□□ -0.7
COL7A1-203ENST00000459756 CRPP02741 224 aa10.65□□□□□ -0.7
COL7A1-203ENST00000459756 ANGP03950 147 aaKnown RBP10.65□□□□□ -0.7
COL7A1-203ENST00000459756 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
COL7A1-203ENST00000459756 BAALCQ8WXS3 180 aa10.65□□□□□ -0.7
COL7A1-203ENST00000459756 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
COL7A1-203ENST00000459756 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
COL7A1-203ENST00000459756 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
COL7A1-203ENST00000459756 ENHOQ6UWT2 76 aa10.64□□□□□ -0.71
COL7A1-203ENST00000459756 SMIM15Q7Z3B0 74 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms