RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LYZL1Q6UWQ5 148 aa9.91□□□□□ -0.82
USP39-206ENST00000448971 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
USP39-206ENST00000448971 DNAH10OSP0CZ25 163 aa9.9□□□□□ -0.82
USP39-206ENST00000448971 CTRLP40313 264 aa9.9□□□□□ -0.82
USP39-206ENST00000448971 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
USP39-206ENST00000448971 Q9UF83 564 aa9.9□□□□□ -0.82
USP39-206ENST00000448971 BTF3P20290 206 aaKnown RBP9.89□□□□□ -0.83
USP39-206ENST00000448971 PEA15Q15121 130 aa9.89□□□□□ -0.83
USP39-206ENST00000448971 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
USP39-206ENST00000448971 LINC01551Q86U37 167 aa9.89□□□□□ -0.83
USP39-206ENST00000448971 Q8N1X5 172 aa9.89□□□□□ -0.83
USP39-206ENST00000448971 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
USP39-206ENST00000448971 K7EP13 123 aa9.88□□□□□ -0.83
USP39-206ENST00000448971 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
USP39-206ENST00000448971 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
USP39-206ENST00000448971 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
USP39-206ENST00000448971 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
USP39-206ENST00000448971 TRBV7-3A0A075B6L6 115 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 A0A087WWC5 75 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 NTF3P20783 257 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 UBE2D3P61077 147 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 UBE2D2P62837 147 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 TWIST1Q15672 202 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.87□□□□□ -0.83
USP39-206ENST00000448971 NEXN-AS1Q8NBZ9 246 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 DPH3P1Q9H4G8 78 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
USP39-206ENST00000448971 A8MWL6 223 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 H7C1H1 209 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 RAB14P61106 215 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 SRSF3P84103 164 aaKnown RBP9.86□□□□□ -0.83
USP39-206ENST00000448971 ADIRFQ15847 76 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 CT83Q5H943 113 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 NFE4Q86UQ8 179 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 C15orf54Q8N8G6 183 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 OR10G8Q8NGN5 311 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 BORCS7Q96B45 105 aa9.86□□□□□ -0.83
USP39-206ENST00000448971 C9JQL5 133 aa9.85□□□□□ -0.83
USP39-206ENST00000448971 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
USP39-206ENST00000448971 SUMO4Q6EEV6 95 aa9.85□□□□□ -0.83
USP39-206ENST00000448971 PGLYRP4Q96LB8 373 aa9.85□□□□□ -0.83
USP39-206ENST00000448971 NAT8Q9UHE5 227 aa9.85□□□□□ -0.83
USP39-206ENST00000448971 URGCP-MRPS24S4R325 110 aa9.85□□□□□ -0.83
USP39-206ENST00000448971 WDR73Q6P4I2 378 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 SMIM15Q7Z3B0 74 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 ISOC2Q96AB3 205 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 SMDT1Q9H4I9 107 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 OSTCQ9NRP0 149 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 TNFRSF18Q9Y5U5 241 aa9.84□□□□□ -0.83
USP39-206ENST00000448971 RPL23P62829 140 aaKnown RBP9.83□□□□□ -0.84
USP39-206ENST00000448971 KCNIP4Q6PIL6 250 aa9.83□□□□□ -0.84
USP39-206ENST00000448971 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
USP39-206ENST00000448971 TSKUQ8WUA8 353 aa9.83□□□□□ -0.84
USP39-206ENST00000448971 Q9HAA7 133 aa9.83□□□□□ -0.84
USP39-206ENST00000448971 DMBT1Q9UGM3 2413 aaPredicted RBP9.82□□□□□ -0.84
USP39-206ENST00000448971 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
USP39-206ENST00000448971 M0QY20 66 aa9.82□□□□□ -0.84
USP39-206ENST00000448971 SPATA12Q7Z6I5 190 aa9.82□□□□□ -0.84
USP39-206ENST00000448971 Q8N3U1 123 aa9.82□□□□□ -0.84
USP39-206ENST00000448971 IBA57-AS1B1ANH7 110 aa9.81□□□□□ -0.84
USP39-206ENST00000448971 PSCAO43653 123 aa9.81□□□□□ -0.84
USP39-206ENST00000448971 RASL11AQ6T310 242 aa9.81□□□□□ -0.84
USP39-206ENST00000448971 DAZ4Q86SG3 579 aaKnown RBP9.81□□□□□ -0.84
USP39-206ENST00000448971 DNAJC30Q96LL9 226 aa9.81□□□□□ -0.84
USP39-206ENST00000448971 GFRA4Q9GZZ7 299 aa9.81□□□□□ -0.84
USP39-206ENST00000448971 DAZ3Q9NR90 486 aaKnown RBP9.81□□□□□ -0.84
USP39-206ENST00000448971 FAT1Q14517 4588 aa9.81□□□□□ -0.84
USP39-206ENST00000448971 A0A087WX48 190 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 TRBV6-8A0A0A6YYG3 113 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 LAGE3Q14657 143 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 TMEM97Q5BJF2 176 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 NIT1Q86X76 327 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 V9GYV3 84 aa9.8□□□□□ -0.84
USP39-206ENST00000448971 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
USP39-206ENST00000448971 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
USP39-206ENST00000448971 FAM231BA6NCW3 169 aa9.79□□□□□ -0.84
USP39-206ENST00000448971 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
USP39-206ENST00000448971 TRBV25-1A0A075B6N4 114 aa9.78□□□□□ -0.84
USP39-206ENST00000448971 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
USP39-206ENST00000448971 FOXA3P55318 350 aaPredicted RBP9.78□□□□□ -0.84
USP39-206ENST00000448971 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
USP39-206ENST00000448971 NIT2Q9NQR4 276 aa9.78□□□□□ -0.84
USP39-206ENST00000448971 CLLU1Q5K131 121 aa9.77□□□□□ -0.85
USP39-206ENST00000448971 NAT8BQ9UHF3 227 aa9.77□□□□□ -0.85
USP39-206ENST00000448971 TRAV8-3A0A0A6YYJ7 113 aa9.76□□□□□ -0.85
USP39-206ENST00000448971 PKIAP61925 76 aa9.76□□□□□ -0.85
USP39-206ENST00000448971 ELOBQ15370 118 aa9.76□□□□□ -0.85
USP39-206ENST00000448971 GATD1Q8NB37 220 aa9.76□□□□□ -0.85
USP39-206ENST00000448971 KLK12Q9UKR0 248 aa9.76□□□□□ -0.85
USP39-206ENST00000448971 A0A087WTM6 91 aa9.75□□□□□ -0.85
USP39-206ENST00000448971 IGHV1-24A0A0C4DH33 117 aa9.75□□□□□ -0.85
USP39-206ENST00000448971 CRPP02741 224 aa9.75□□□□□ -0.85
USP39-206ENST00000448971 RIGQ13278 110 aa9.75□□□□□ -0.85
USP39-206ENST00000448971 MPV17L2Q567V2 206 aa9.75□□□□□ -0.85
USP39-206ENST00000448971 NTM-AS1Q6ZSK4 140 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms