RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TRGV11A0A075B6L2 103 aa12.64□□□□□ -0.39
PMS1-213ENST00000441310 A0A0B4J2C4 111 aa12.64□□□□□ -0.39
PMS1-213ENST00000441310 ZNF22P17026 224 aaPredicted RBP12.64□□□□□ -0.39
PMS1-213ENST00000441310 CEMP1Q6PRD7 247 aaPredicted RBP12.64□□□□□ -0.39
PMS1-213ENST00000441310 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
PMS1-213ENST00000441310 H7C423 109 aa12.63□□□□□ -0.39
PMS1-213ENST00000441310 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
PMS1-213ENST00000441310 KLK5Q9Y337 293 aaPredicted RBP12.63□□□□□ -0.39
PMS1-213ENST00000441310 RNF5Q99942 180 aa12.62□□□□□ -0.39
PMS1-213ENST00000441310 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 LMO4P61968 165 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 DNAJC30Q96LL9 226 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 PRB1P04280 392 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 SAA4P35542 130 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 SIRPDQ9H106 197 aa12.61□□□□□ -0.39
PMS1-213ENST00000441310 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
PMS1-213ENST00000441310 ADARB2-AS1A8MUL3 147 aa12.6□□□□□ -0.39
PMS1-213ENST00000441310 PRSS2P07478 247 aa12.6□□□□□ -0.39
PMS1-213ENST00000441310 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
PMS1-213ENST00000441310 OPRPNQ99935 248 aaPredicted RBP12.6□□□□□ -0.39
PMS1-213ENST00000441310 BUB3O43684 328 aa12.6□□□□□ -0.39
PMS1-213ENST00000441310 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
PMS1-213ENST00000441310 TLN2Q9Y4G6 2542 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 ECSCRQ19T08 205 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 Q6ZSV7 163 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 NPBQ8NG41 125 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 UBE2E1P51965 193 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 ZNF580Q9UK33 172 aa12.59□□□□□ -0.39
PMS1-213ENST00000441310 NPC2P61916 151 aa12.58□□□□□ -0.39
PMS1-213ENST00000441310 TMEM219Q86XT9 240 aa12.58□□□□□ -0.39
PMS1-213ENST00000441310 TRBV30A0A0K0K1B3 111 aa12.58□□□□□ -0.4
PMS1-213ENST00000441310 TRBV7-7A0A0K0K1E9 115 aa12.58□□□□□ -0.4
PMS1-213ENST00000441310 NPFFO15130 113 aa12.58□□□□□ -0.4
PMS1-213ENST00000441310 HERVK_113P63121 156 aa12.58□□□□□ -0.4
PMS1-213ENST00000441310 BRD3OSQ6XYD6 125 aa12.58□□□□□ -0.4
PMS1-213ENST00000441310 NDUFA7O95182 113 aa12.58□□□□□ -0.4
PMS1-213ENST00000441310 LINC00527Q9UJ94 153 aa12.57□□□□□ -0.4
PMS1-213ENST00000441310 ICOSQ9Y6W8 199 aa12.57□□□□□ -0.4
PMS1-213ENST00000441310 IGHV1-69DA0A0B4J2H0 117 aa12.57□□□□□ -0.4
PMS1-213ENST00000441310 M0R2P5 195 aa12.57□□□□□ -0.4
PMS1-213ENST00000441310 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
PMS1-213ENST00000441310 DEFB1P60022 68 aa12.57□□□□□ -0.4
PMS1-213ENST00000441310 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 G3V318 75 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 GNRH2O43555 120 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 EBI3Q14213 229 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 EEF1AKMT3Q96AZ1 226 aa12.56□□□□□ -0.4
PMS1-213ENST00000441310 TRAV8-3A0A0A6YYJ7 113 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 IGHV4-61A0A0C4DH41 118 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 SMIM9A6NGZ8 99 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 LEPROTO15243 131 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 Q8N9W7 124 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 METTL26Q96S19 204 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 H3BT86 120 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 FAM19A5Q7Z5A7 132 aaPredicted RBP12.55□□□□□ -0.4
PMS1-213ENST00000441310 JPT2Q9H910 190 aa12.55□□□□□ -0.4
PMS1-213ENST00000441310 F5H697 171 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 C9orf47Q6ZRZ4 202 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 POM121L12Q8N7R1 296 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 TMEM141Q96I45 108 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 Q8N6K4 173 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 LINC01600Q96MT4 127 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 ZNF256Q9Y2P7 627 aaPredicted RBP12.54□□□□□ -0.4
PMS1-213ENST00000441310 COX6CP09669 75 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 C15orf32Q32M92 178 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 CCL19Q99731 98 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 ZFAND3Q9H8U3 227 aa12.54□□□□□ -0.4
PMS1-213ENST00000441310 FAM240AA0A1B0GVK7 77 aa12.53□□□□□ -0.4
PMS1-213ENST00000441310 A0A0J9YXY3 114 aa12.53□□□□□ -0.4
PMS1-213ENST00000441310 A0A087WWL8 130 aa12.52□□□□□ -0.4
PMS1-213ENST00000441310 ATP6V0E1O15342 81 aa12.52□□□□□ -0.4
PMS1-213ENST00000441310 TIMM17AQ99595 171 aa12.52□□□□□ -0.4
PMS1-213ENST00000441310 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.4
PMS1-213ENST00000441310 PPP1R17O96001 155 aa12.52□□□□□ -0.41
PMS1-213ENST00000441310 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
PMS1-213ENST00000441310 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
PMS1-213ENST00000441310 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
PMS1-213ENST00000441310 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
PMS1-213ENST00000441310 SDHAF1A6NFY7 115 aa12.51□□□□□ -0.41
PMS1-213ENST00000441310 J3KT08 172 aa12.51□□□□□ -0.41
PMS1-213ENST00000441310 MUC4Q99102 2169 aa12.51□□□□□ -0.41
PMS1-213ENST00000441310 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
PMS1-213ENST00000441310 TRAV21A0A0B4J279 112 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 A0A0J9YXV3 536 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 LY6EQ16553 131 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 VCYO14598 125 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 UQCRQO14949 82 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 POLR2KP53803 58 aaKnown RBP12.5□□□□□ -0.41
PMS1-213ENST00000441310 C20orf173Q96LM9 149 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms