RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 A0A087WX48 190 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 TRBV6-8A0A0A6YYG3 113 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 TMEM262E9PQX1 116 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 M0QY20 66 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 TRGC1P0CF51 173 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 CTRLP40313 264 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 TWIST1Q15672 202 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 SUMO4Q6EEV6 95 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.17□□□□□ -0.94
LTBR-202ENST00000440421 KLK12Q9UKR0 248 aa9.17□□□□□ -0.94
LTBR-202ENST00000440421 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
LTBR-202ENST00000440421 CDPF1Q6NVV7 123 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 KCNIP4Q6PIL6 250 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 SMIM7Q9BQ49 75 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 TM2D2Q9BX73 214 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
LTBR-202ENST00000440421 H7C1H1 209 aa9.15□□□□□ -0.94
LTBR-202ENST00000440421 SRP19P09132 144 aaKnown RBP9.15□□□□□ -0.94
LTBR-202ENST00000440421 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
LTBR-202ENST00000440421 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
LTBR-202ENST00000440421 CHCHD5Q9BSY4 110 aa9.15□□□□□ -0.94
LTBR-202ENST00000440421 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
LTBR-202ENST00000440421 FAM231DQ6ZW35 169 aa9.14□□□□□ -0.95
LTBR-202ENST00000440421 MAPKAPK5-AS1Q8N8E1 139 aa9.14□□□□□ -0.95
LTBR-202ENST00000440421 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
LTBR-202ENST00000440421 CNFNQ9BYD5 112 aa9.14□□□□□ -0.95
LTBR-202ENST00000440421 IGLV5-52A0A0A0MRZ9 124 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 A8MWL6 223 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 LECT2O14960 151 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 WFDC2Q14508 124 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 ELOBQ15370 118 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 RASL11AQ6T310 242 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 Q8N814 137 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 C15orf54Q8N8G6 183 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 PGLYRP4Q96LB8 373 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 CHCHD7Q9BUK0 85 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 KRTAP17-1Q9BYP8 105 aa9.13□□□□□ -0.95
LTBR-202ENST00000440421 IGKV2D-24A0A075B6R9 120 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
LTBR-202ENST00000440421 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 TMEM97Q5BJF2 176 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 TEX261Q6UWH6 196 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 RMI2Q96E14 147 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 RYR1P21817 5038 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
LTBR-202ENST00000440421 TRBV25-1A0A075B6N4 114 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 GCSHP23434 173 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
LTBR-202ENST00000440421 GAGE6Q13070 117 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 ATRAIDQ6UW56 229 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 Q8N976 141 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 BAALCQ8WXS3 180 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 KRTAP4-5Q9BYR2 181 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 NIT2Q9NQR4 276 aa9.11□□□□□ -0.95
LTBR-202ENST00000440421 IGHV1-24A0A0C4DH33 117 aa9.1□□□□□ -0.95
LTBR-202ENST00000440421 C9JQL5 133 aa9.1□□□□□ -0.95
LTBR-202ENST00000440421 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
LTBR-202ENST00000440421 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
LTBR-202ENST00000440421 CT83Q5H943 113 aa9.1□□□□□ -0.95
LTBR-202ENST00000440421 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
LTBR-202ENST00000440421 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
LTBR-202ENST00000440421 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
LTBR-202ENST00000440421 CRPP02741 224 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 PKIAP61925 76 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 Q0VG73 95 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 IQCJQ1A5X6 159 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 ENHOQ6UWT2 76 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 BORCS7Q96B45 105 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 OSTCQ9NRP0 149 aa9.09□□□□□ -0.95
LTBR-202ENST00000440421 HSPG2P98160 4391 aa9.08□□□□□ -0.96
LTBR-202ENST00000440421 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
LTBR-202ENST00000440421 HIGD1CA8MV81 97 aa9.08□□□□□ -0.96
LTBR-202ENST00000440421 RBX1P62877 108 aa9.08□□□□□ -0.96
LTBR-202ENST00000440421 TMEM241Q24JQ0 296 aa9.08□□□□□ -0.96
LTBR-202ENST00000440421 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
LTBR-202ENST00000440421 TSKUQ8WUA8 353 aa9.08□□□□□ -0.96
LTBR-202ENST00000440421 PCLOQ9Y6V0 5065 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
LTBR-202ENST00000440421 PEA15Q15121 130 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 FAM74A3Q4VXF1 159 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 RPL39LQ96EH5 51 aaKnown RBP9.07□□□□□ -0.96
LTBR-202ENST00000440421 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
LTBR-202ENST00000440421 A0A1B0GUT8 65 aa9.06□□□□□ -0.96
LTBR-202ENST00000440421 XGP55808 180 aa9.06□□□□□ -0.96
LTBR-202ENST00000440421 ADIRFQ15847 76 aa9.06□□□□□ -0.96
LTBR-202ENST00000440421 Q8N1X5 172 aa9.06□□□□□ -0.96
LTBR-202ENST00000440421 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
LTBR-202ENST00000440421 GFRA4Q9GZZ7 299 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms