RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CHCHD5Q9BSY4 110 aa13.51□□□□□ -0.25
CPNE1-219ENST00000440240 SCO2A0A1W2PP80 73 aa13.5□□□□□ -0.25
CPNE1-219ENST00000440240 MIAQ16674 131 aa13.5□□□□□ -0.25
CPNE1-219ENST00000440240 TMUB2Q71RG4 321 aa13.5□□□□□ -0.25
CPNE1-219ENST00000440240 A0A1B0GV50 99 aa13.49□□□□□ -0.25
CPNE1-219ENST00000440240 SMIM17P0DL12 118 aa13.49□□□□□ -0.25
CPNE1-219ENST00000440240 IGLV2-8P01709 118 aa13.48□□□□□ -0.25
CPNE1-219ENST00000440240 VAX2Q9UIW0 290 aa13.48□□□□□ -0.25
CPNE1-219ENST00000440240 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
CPNE1-219ENST00000440240 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
CPNE1-219ENST00000440240 SMLR1H3BR10 107 aa13.47□□□□□ -0.25
CPNE1-219ENST00000440240 H2AFB1P0C5Y9 115 aa13.47□□□□□ -0.25
CPNE1-219ENST00000440240 DGAT2L7PQ6IED9 249 aa13.47□□□□□ -0.25
CPNE1-219ENST00000440240 A0A0D9SG52 128 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 HMSDA8MTL9 139 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 USP17L23D6RBM5 183 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 KRTAP10-4P60372 401 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-219ENST00000440240 SSTP61278 116 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 AP1S3Q96PC3 154 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 DERL1Q9BUN8 251 aa13.46□□□□□ -0.25
CPNE1-219ENST00000440240 HLA-DQA1P01909 254 aa13.45□□□□□ -0.26
CPNE1-219ENST00000440240 EIF5AP63241 154 aaKnown RBP13.45□□□□□ -0.26
CPNE1-219ENST00000440240 PRR34Q9NV39 138 aa13.45□□□□□ -0.26
CPNE1-219ENST00000440240 KIF25-AS1Q9Y6Z4 181 aa13.45□□□□□ -0.26
CPNE1-219ENST00000440240 TRBV25-1A0A075B6N4 114 aa13.44□□□□□ -0.26
CPNE1-219ENST00000440240 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
CPNE1-219ENST00000440240 OXTP01178 125 aa13.44□□□□□ -0.26
CPNE1-219ENST00000440240 RPL35P42766 123 aaKnown RBP13.44□□□□□ -0.26
CPNE1-219ENST00000440240 RBX1P62877 108 aa13.44□□□□□ -0.26
CPNE1-219ENST00000440240 SERTAD4-AS1Q5TG53 156 aa13.44□□□□□ -0.26
CPNE1-219ENST00000440240 LRP1Q07954 4544 aaKnown RBP13.43□□□□□ -0.26
CPNE1-219ENST00000440240 BCL2L11O43521 198 aa13.42□□□□□ -0.26
CPNE1-219ENST00000440240 PRSS1P07477 247 aa13.42□□□□□ -0.26
CPNE1-219ENST00000440240 GAGE6Q13070 117 aa13.42□□□□□ -0.26
CPNE1-219ENST00000440240 LINC00269Q8N2A0 174 aa13.42□□□□□ -0.26
CPNE1-219ENST00000440240 C9orf163Q8N9P6 203 aa13.42□□□□□ -0.26
CPNE1-219ENST00000440240 H7C1H1 209 aa13.41□□□□□ -0.26
CPNE1-219ENST00000440240 IQCJQ1A5X6 159 aa13.41□□□□□ -0.26
CPNE1-219ENST00000440240 DAZAP1Q96EP5 407 aaKnown RBP13.41□□□□□ -0.26
CPNE1-219ENST00000440240 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
CPNE1-219ENST00000440240 IGHV1-24A0A0C4DH33 117 aa13.4□□□□□ -0.26
CPNE1-219ENST00000440240 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
CPNE1-219ENST00000440240 CLRN3Q8NCR9 226 aa13.4□□□□□ -0.26
CPNE1-219ENST00000440240 C11orf52Q96A22 123 aa13.4□□□□□ -0.26
CPNE1-219ENST00000440240 M0QY20 66 aa13.39□□□□□ -0.27
CPNE1-219ENST00000440240 RPL37AP61513 92 aaKnown RBP13.39□□□□□ -0.27
CPNE1-219ENST00000440240 KRTAP26-1Q6PEX3 210 aa13.39□□□□□ -0.27
CPNE1-219ENST00000440240 FER1L6-AS1Q8NA97 138 aa13.39□□□□□ -0.27
CPNE1-219ENST00000440240 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
CPNE1-219ENST00000440240 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
CPNE1-219ENST00000440240 MGPP08493 103 aa13.38□□□□□ -0.27
CPNE1-219ENST00000440240 IGLC6P0CF74 106 aa13.38□□□□□ -0.27
CPNE1-219ENST00000440240 CACNG7P62955 275 aa13.38□□□□□ -0.27
CPNE1-219ENST00000440240 CLPSL2Q6UWE3 100 aa13.38□□□□□ -0.27
CPNE1-219ENST00000440240 OR2D3Q8NGH3 330 aa13.38□□□□□ -0.27
CPNE1-219ENST00000440240 TRAV1-1A0A0B4J248 108 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 F2Z2F3 143 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 CCL20P78556 96 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 REG3AQ06141 175 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 CENPWQ5EE01 88 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 SMIM12Q96EX1 92 aa13.37□□□□□ -0.27
CPNE1-219ENST00000440240 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
CPNE1-219ENST00000440240 TEX46H3BTG2 121 aa13.36□□□□□ -0.27
CPNE1-219ENST00000440240 P01737 135 aa13.36□□□□□ -0.27
CPNE1-219ENST00000440240 GZMBP10144 247 aa13.36□□□□□ -0.27
CPNE1-219ENST00000440240 A0A1B0GUV1 79 aa13.35□□□□□ -0.27
CPNE1-219ENST00000440240 C19orf71A6NCJ1 209 aa13.35□□□□□ -0.27
CPNE1-219ENST00000440240 RAB5CP51148 216 aa13.35□□□□□ -0.27
CPNE1-219ENST00000440240 SUMO4Q6EEV6 95 aa13.35□□□□□ -0.27
CPNE1-219ENST00000440240 RASL11AQ6T310 242 aa13.35□□□□□ -0.27
CPNE1-219ENST00000440240 SDIM1Q6ZPB5 146 aa13.35□□□□□ -0.27
CPNE1-219ENST00000440240 FAT3Q8TDW7 4589 aa13.34□□□□□ -0.27
CPNE1-219ENST00000440240 GNG4P50150 75 aa13.34□□□□□ -0.27
CPNE1-219ENST00000440240 NKX2-5P52952 324 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-219ENST00000440240 TMEM243Q9BU79 118 aa13.34□□□□□ -0.27
CPNE1-219ENST00000440240 HMCN2Q8NDA2 5059 aa13.33□□□□□ -0.28
CPNE1-219ENST00000440240 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
CPNE1-219ENST00000440240 TRGC1P0CF51 173 aa13.33□□□□□ -0.28
CPNE1-219ENST00000440240 EIF5AL1Q6IS14 154 aaKnown RBP13.33□□□□□ -0.28
CPNE1-219ENST00000440240 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.28
CPNE1-219ENST00000440240 NIT2Q9NQR4 276 aa13.33□□□□□ -0.28
CPNE1-219ENST00000440240 BIN3Q9NQY0 253 aa13.33□□□□□ -0.28
CPNE1-219ENST00000440240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-219ENST00000440240 RAB19A4D1S5 217 aa13.32□□□□□ -0.28
CPNE1-219ENST00000440240 PDE6DO43924 150 aa13.32□□□□□ -0.28
CPNE1-219ENST00000440240 CNBPP62633 177 aaKnown RBP13.32□□□□□ -0.28
CPNE1-219ENST00000440240 PGLYRP4Q96LB8 373 aa13.32□□□□□ -0.28
CPNE1-219ENST00000440240 IFNA1P01562 189 aa13.31□□□□□ -0.28
CPNE1-219ENST00000440240 DPH3P1Q9H4G8 78 aa13.31□□□□□ -0.28
CPNE1-219ENST00000440240 hDV102S1A0JD36 115 aa13.3□□□□□ -0.28
CPNE1-219ENST00000440240 NTF3P20783 257 aa13.3□□□□□ -0.28
CPNE1-219ENST00000440240 MEF2BQ02080 365 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-219ENST00000440240 LYZL1Q6UWQ5 148 aa13.3□□□□□ -0.28
CPNE1-219ENST00000440240 AP5S1Q9NUS5 200 aa13.3□□□□□ -0.28
CPNE1-219ENST00000440240 MED9Q9NWA0 146 aa13.3□□□□□ -0.28
CPNE1-219ENST00000440240 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
CPNE1-219ENST00000440240 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-219ENST00000440240 UBE2L6O14933 153 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms