RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FAM231DQ6ZW35 169 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 DAZ4Q86SG3 579 aaKnown RBP7.06□□□□□ -1.28
MCF2L-216ENST00000439475 NEXN-AS1Q8NBZ9 246 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 BORCS7Q96B45 105 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 RMI2Q96E14 147 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 DPH3P1Q9H4G8 78 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 Q9HAA7 133 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 DAZ3Q9NR90 486 aaKnown RBP7.06□□□□□ -1.28
MCF2L-216ENST00000439475 COX11Q9Y6N1 276 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 KIF25-AS1Q9Y6Z4 181 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 FAT2Q9NYQ8 4349 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 FRAS1Q86XX4 4008 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 K7EN84 100 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 SRP19P09132 144 aaKnown RBP7.05□□□□□ -1.28
MCF2L-216ENST00000439475 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 TEX261Q6UWH6 196 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 NIT1Q86X76 327 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
MCF2L-216ENST00000439475 A0A087WTM6 91 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 TRBV6-8A0A0A6YYG3 113 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 CTRLP40313 264 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 CT83Q5H943 113 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 C15orf54Q8N8G6 183 aa7.04□□□□□ -1.28
MCF2L-216ENST00000439475 TRBV25-1A0A075B6N4 114 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 M0QY20 66 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 TMEM241Q24JQ0 296 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 LINC01551Q86U37 167 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 FRZBQ92765 325 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 NIT2Q9NQR4 276 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 OSTCQ9NRP0 149 aa7.03□□□□□ -1.28
MCF2L-216ENST00000439475 DNAH11Q96DT5 4516 aa7.02□□□□□ -1.28
MCF2L-216ENST00000439475 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
MCF2L-216ENST00000439475 Q0VG73 95 aa7.02□□□□□ -1.29
MCF2L-216ENST00000439475 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
MCF2L-216ENST00000439475 CHCHD5Q9BSY4 110 aa7.02□□□□□ -1.29
MCF2L-216ENST00000439475 KLK12Q9UKR0 248 aa7.02□□□□□ -1.29
MCF2L-216ENST00000439475 DYNC1H1Q14204 4646 aaKnown RBP7.01□□□□□ -1.29
MCF2L-216ENST00000439475 FAM231BA6NCW3 169 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 CRPP02741 224 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 KRTAP10-2P60368 255 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 RAB14P61106 215 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 TSKUQ8WUA8 353 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 UBE2WQ96B02 151 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 GFRA4Q9GZZ7 299 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 NAT8Q9UHE5 227 aa7.01□□□□□ -1.29
MCF2L-216ENST00000439475 IGHV1-24A0A0C4DH33 117 aa7□□□□□ -1.29
MCF2L-216ENST00000439475 CDK2AP2O75956 126 aa7□□□□□ -1.29
MCF2L-216ENST00000439475 NTN5Q8WTR8 489 aaPredicted RBP7□□□□□ -1.29
MCF2L-216ENST00000439475 IGKV2D-24A0A075B6R9 120 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
MCF2L-216ENST00000439475 RPL23P62829 140 aaKnown RBP6.99□□□□□ -1.29
MCF2L-216ENST00000439475 RIGQ13278 110 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 COTL1Q14019 142 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 ADIRFQ15847 76 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 IQCJQ1A5X6 159 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 ATRAIDQ6UW56 229 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 Q8N3U1 123 aa6.99□□□□□ -1.29
MCF2L-216ENST00000439475 IGLV5-52A0A0A0MRZ9 124 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 HIGD1CA8MV81 97 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 UBE2L6O14933 153 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 GCSHP23434 173 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 GAGE6Q13070 117 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 NTM-AS1Q6ZSK4 140 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 Q8N814 137 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 ISOC2Q96AB3 205 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 C1orf43Q9BWL3 253 aa6.98□□□□□ -1.29
MCF2L-216ENST00000439475 PKD1P98161 4303 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 MIAQ16674 131 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 Q8N976 141 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 TMEM243Q9BU79 118 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 TMEM191AQ9H0A3 160 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 V9GYV3 84 aa6.97□□□□□ -1.29
MCF2L-216ENST00000439475 C9JQL5 133 aa6.96□□□□□ -1.3
MCF2L-216ENST00000439475 NCR2O95944 276 aa6.96□□□□□ -1.3
MCF2L-216ENST00000439475 AMTP48728 403 aa6.96□□□□□ -1.3
MCF2L-216ENST00000439475 RBX1P62877 108 aa6.96□□□□□ -1.3
MCF2L-216ENST00000439475 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 PPP1R17O96001 155 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 PMCHP20382 165 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
MCF2L-216ENST00000439475 C14orf177Q52M58 125 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 NUP35Q8NFH5 326 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
MCF2L-216ENST00000439475 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
MCF2L-216ENST00000439475 TRAV26-2A0A0B4J265 109 aa6.94□□□□□ -1.3
MCF2L-216ENST00000439475 A0A1B0GW15 77 aa6.94□□□□□ -1.3
MCF2L-216ENST00000439475 I3L3M4 83 aa6.94□□□□□ -1.3
MCF2L-216ENST00000439475 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms