RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NPFFO15130 113 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 DEFB4AO15263 64 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 PDE6DO43924 150 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 YPEL1O60688 119 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 ATG12O94817 140 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 S1PR2O95136 353 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 CRYZL1O95825 349 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2H2O95918 312 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV3-11P01762 117 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 APCSP02743 223 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 IL4P05112 153 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 REG1AP05451 166 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SCTP09683 121 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR5AC1P0C628 307 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TLX1NBP0CAT3 122 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR13C7P0DN81 318 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 FGF6P10767 208 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 HLA-DMBP28068 263 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 S100GP29377 79 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR10J1P30954 320 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OPRK1P41145 380 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 MP68P56378 58 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 RHOBP62745 196 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 HLA-DRB3P79483 266 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SERF2P84101 59 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 MEF2CQ06413 473 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SYCNQ0VAF6 134 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SS18Q15532 418 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 PIGYQ3MUY2 71 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 AKR1C8PQ5T2L2 129 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 FAM222AQ5U5X8 452 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 ALKAL2Q6UX46 152 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM14EPQ6UXP3 125 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 DPPA3Q6W0C5 159 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 LYZL2Q7Z4W2 148 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMIM20Q8N5G0 67 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SLC25A29Q8N8R3 303 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 LINC00304Q8N9R0 145 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF439Q8NDP4 499 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR13C6PQ8NH95 151 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 LHFPL5Q8TAF8 219 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SLC25A40Q8TBP6 338 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 MBD3L1Q8WWY6 194 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 ARL11Q969Q4 196 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 GALMQ96C23 342 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 GNPNAT1Q96EK6 184 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 YPEL2Q96QA6 119 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TIMM17AQ99595 171 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 HSD17B10Q99714 261 aaKnown RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 PSMG3Q9BT73 122 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 PDCD10Q9BUL8 212 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 GGACTQ9BVM4 153 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF471Q9BX82 626 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SEC11CQ9BY50 192 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2J1Q9GZK6 312 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 FXYD6Q9H0Q3 95 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 WFDC10AQ9H1F0 79 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TAF9BQ9HBM6 251 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 LYRM2Q9NU23 88 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR5AC2Q9NZP5 309 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TAAR3PQ9P1P4 343 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 PRNDQ9UKY0 176 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TRAV8-1A0A0A6YYK1 113 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV3-72A0A0B4J1Y9 119 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV7-4-1A0A0J9YVY3 117 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 A0A1B0GW54 56 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ODAMA1E959 279 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 MAP1LC3B2A6NCE7 125 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 FNDC10F2Z333 226 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 I3L521 148 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 M0R1X1 148 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SLC17A3O00476 420 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SYNGR2O43760 224 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 COX7A2P2O60397 106 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 MT-CO2P00403 227 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1-39P01597 117 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1-5P01602 117 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 HLA-DQA1P01909 254 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1D-39P04432 117 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 LGALS1P09382 135 aaKnown RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR10J4P0C629 311 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SCGB1C2P0DMR2 95 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SNCAP37840 140 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 MPV17P39210 176 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 LPAR6P43657 344 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 PSMB3P49720 205 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF137PP52743 207 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 KLF3P57682 345 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF616Q08AN1 781 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM267Q0VDI3 215 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF816Q0VGE8 651 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 CATR1Q13166 79 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 PEA15Q15121 130 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMIM21Q3B7S5 101 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SP6Q3SY56 376 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 MORN2Q502X0 79 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 KHDC3LQ587J8 217 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 RPL7L1Q6DKI1 246 aaKnown RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF818PQ6ZRF7 136 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms