RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 TRAV26-2A0A0B4J265 109 aa6.24□□□□□ -1.41
TMEM39A-202ENST00000438581 GNRH2O43555 120 aa6.24□□□□□ -1.41
TMEM39A-202ENST00000438581 LTAP01374 205 aa6.24□□□□□ -1.41
TMEM39A-202ENST00000438581 C10orf99Q6UWK7 81 aa6.24□□□□□ -1.41
TMEM39A-202ENST00000438581 WI2-2373I1.2A0A1W2PRP0 233 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 CCDC179H3BU77 68 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 IGLC6P0CF74 106 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 MRPS36P82909 103 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 LAGE3Q14657 143 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 LINC01559Q495D7 138 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 C3orf79P0CE67 100 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 FAM104BQ5XKR9 115 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 TMEM158Q8WZ71 300 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 DSCAML1Q8TD84 2053 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 DNAJC9-AS1A6NH13 148 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 PRSS46E5RG02 174 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 AVPP01185 164 aa6.23□□□□□ -1.41
TMEM39A-202ENST00000438581 ACYP1P07311 99 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 CD28P10747 220 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 C1orf159Q96HA4 380 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 F8P00451 2351 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 SMIM27A0A1W2PRY6 76 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 ATOX1O00244 68 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 COX8AP10176 69 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 DLX4Q92988 240 aaPredicted RBP6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 PSMB8P28062 276 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 EBI3Q14213 229 aa6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
TMEM39A-202ENST00000438581 C2orf70A6NJV1 201 aa6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 A8MWV9 139 aa6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 VCYO14598 125 aa6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 PLA2G2AP14555 144 aa6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 CXCL5P42830 114 aa6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 Q6ZS46 218 aa6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 MAP1AP78559 2803 aaPredicted RBP6.21□□□□□ -1.41
TMEM39A-202ENST00000438581 PKIGQ9Y2B9 76 aa6.21□□□□□ -1.42
TMEM39A-202ENST00000438581 TEN1Q86WV5 123 aa6.21□□□□□ -1.42
TMEM39A-202ENST00000438581 MBD6Q96DN6 1003 aa6.21□□□□□ -1.42
TMEM39A-202ENST00000438581 MSRB1Q9NZV6 116 aa6.21□□□□□ -1.42
TMEM39A-202ENST00000438581 TRAV13-1A0A0B4J241 112 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 INAFM1C9JVW0 142 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 hDV102S1A0JD36 115 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 Q6YL49 198 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 CFAP46Q8IYW2 2715 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 GPHB5Q86YW7 130 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 FRMD6-AS1P0C7T7 363 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 Q6ZVH6 145 aa6.2□□□□□ -1.42
TMEM39A-202ENST00000438581 IGHV1-24A0A0C4DH33 117 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 IGHV3-38A0A0C4DH36 116 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 NPYP01303 97 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 IGF1P05019 195 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 CRYGAP11844 174 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 PFN2P35080 140 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 TRAV8-4A0A0B4J246 113 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 ADARB2-AS1A8MUL3 147 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 IGKCP01834 107 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 CELSR3Q9NYQ7 3312 aa6.19□□□□□ -1.42
TMEM39A-202ENST00000438581 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 SDHAF1A6NFY7 115 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 IGF2BP2-AS1Q96M15 143 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 AKAP13Q12802 2813 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 CLPSL1A2RUU4 121 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 K7EMT4 169 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 M0R2P5 195 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 NPC2P61916 151 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 Q8N6K4 173 aa6.18□□□□□ -1.42
TMEM39A-202ENST00000438581 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 Q6ZSV7 163 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 SMR3AQ99954 134 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 SCRT2Q9NQ03 307 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 LENEPQ9Y5L5 61 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 HELZ2Q9BYK8 2649 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 RBAKDNA6NC62 111 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 TRPT1Q86TN4 253 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 GTSF1Q8WW33 167 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 TRAV8-2A0A0B4J237 113 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 IGLL1P15814 213 aa6.17□□□□□ -1.42
TMEM39A-202ENST00000438581 RPL18AQ02543 176 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms