RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 IGLV2-8P01709 118 aa11.76□□□□□ -0.53
GTF3A-204ENST00000438571 CRPP02741 224 aa11.76□□□□□ -0.53
GTF3A-204ENST00000438571 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
GTF3A-204ENST00000438571 Q0VG73 95 aa11.76□□□□□ -0.53
GTF3A-204ENST00000438571 CXCL1P09341 107 aa11.75□□□□□ -0.53
GTF3A-204ENST00000438571 SFT2D1Q8WV19 159 aa11.75□□□□□ -0.53
GTF3A-204ENST00000438571 CHCHD5Q9BSY4 110 aa11.75□□□□□ -0.53
GTF3A-204ENST00000438571 ZNF471Q9BX82 626 aaPredicted RBP11.75□□□□□ -0.53
GTF3A-204ENST00000438571 KIF25-AS1Q9Y6Z4 181 aa11.75□□□□□ -0.53
GTF3A-204ENST00000438571 UBR4Q5T4S7 5183 aa11.74□□□□□ -0.53
GTF3A-204ENST00000438571 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
GTF3A-204ENST00000438571 AKAP14Q86UN6 197 aa11.74□□□□□ -0.53
GTF3A-204ENST00000438571 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
GTF3A-204ENST00000438571 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
GTF3A-204ENST00000438571 SSBP4Q9BWG4 385 aaPredicted RBP11.74□□□□□ -0.53
GTF3A-204ENST00000438571 PRSS1P07477 247 aa11.73□□□□□ -0.53
GTF3A-204ENST00000438571 GAGE6Q13070 117 aa11.73□□□□□ -0.53
GTF3A-204ENST00000438571 SPANXN1Q5VSR9 72 aa11.73□□□□□ -0.53
GTF3A-204ENST00000438571 KRTAP26-1Q6PEX3 210 aa11.73□□□□□ -0.53
GTF3A-204ENST00000438571 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
GTF3A-204ENST00000438571 F5H697 171 aa11.72□□□□□ -0.53
GTF3A-204ENST00000438571 PANO1I0J062 215 aa11.72□□□□□ -0.53
GTF3A-204ENST00000438571 OR5AL1P0C617 328 aa11.72□□□□□ -0.53
GTF3A-204ENST00000438571 C14orf177Q52M58 125 aa11.72□□□□□ -0.53
GTF3A-204ENST00000438571 PFDN1O60925 122 aa11.71□□□□□ -0.53
GTF3A-204ENST00000438571 GZMBP10144 247 aa11.71□□□□□ -0.53
GTF3A-204ENST00000438571 RBX1P62877 108 aa11.71□□□□□ -0.53
GTF3A-204ENST00000438571 TCTE3Q8IZS6 198 aa11.71□□□□□ -0.53
GTF3A-204ENST00000438571 DERL1Q9BUN8 251 aa11.71□□□□□ -0.53
GTF3A-204ENST00000438571 VAX2Q9UIW0 290 aa11.71□□□□□ -0.53
GTF3A-204ENST00000438571 S100A9P06702 114 aaKnown RBP11.7□□□□□ -0.54
GTF3A-204ENST00000438571 ZNF345Q14585 488 aa11.7□□□□□ -0.54
GTF3A-204ENST00000438571 PRR34Q9NV39 138 aa11.7□□□□□ -0.54
GTF3A-204ENST00000438571 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.7□□□□□ -0.54
GTF3A-204ENST00000438571 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
GTF3A-204ENST00000438571 MIAQ16674 131 aa11.69□□□□□ -0.54
GTF3A-204ENST00000438571 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
GTF3A-204ENST00000438571 MGPP08493 103 aa11.68□□□□□ -0.54
GTF3A-204ENST00000438571 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
GTF3A-204ENST00000438571 CCL20P78556 96 aa11.68□□□□□ -0.54
GTF3A-204ENST00000438571 TMUB2Q71RG4 321 aa11.68□□□□□ -0.54
GTF3A-204ENST00000438571 DAZAP1Q96EP5 407 aaKnown RBP11.68□□□□□ -0.54
GTF3A-204ENST00000438571 AP1S3Q96PC3 154 aa11.68□□□□□ -0.54
GTF3A-204ENST00000438571 IGLV10-54A0A075B6I4 117 aa11.67□□□□□ -0.54
GTF3A-204ENST00000438571 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
GTF3A-204ENST00000438571 BCL2L11O43521 198 aa11.67□□□□□ -0.54
GTF3A-204ENST00000438571 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
GTF3A-204ENST00000438571 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 OXTP01178 125 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 H2AFB1P0C5Y9 115 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 SUMO4Q6EEV6 95 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 GFRA4Q9GZZ7 299 aa11.66□□□□□ -0.54
GTF3A-204ENST00000438571 M0QY20 66 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 CENPWQ5EE01 88 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.65□□□□□ -0.54
GTF3A-204ENST00000438571 C11orf52Q96A22 123 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 GNG13Q9P2W3 67 aa11.65□□□□□ -0.54
GTF3A-204ENST00000438571 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
GTF3A-204ENST00000438571 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
GTF3A-204ENST00000438571 NKX2-5P52952 324 aaPredicted RBP11.64□□□□□ -0.55
GTF3A-204ENST00000438571 PKIAP61925 76 aa11.64□□□□□ -0.55
GTF3A-204ENST00000438571 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 HMSDA8MTL9 139 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 REG3AQ06141 175 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 SERTAD4-AS1Q5TG53 156 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
GTF3A-204ENST00000438571 A0A0D9SG52 128 aa11.62□□□□□ -0.55
GTF3A-204ENST00000438571 RAB19A4D1S5 217 aa11.62□□□□□ -0.55
GTF3A-204ENST00000438571 SDIM1Q6ZPB5 146 aa11.62□□□□□ -0.55
GTF3A-204ENST00000438571 MANBALQ9NQG1 85 aa11.61□□□□□ -0.55
GTF3A-204ENST00000438571 SLPIP03973 132 aa11.6□□□□□ -0.55
GTF3A-204ENST00000438571 RAB5CP51148 216 aa11.6□□□□□ -0.55
GTF3A-204ENST00000438571 TRBV20OR9-2A0A075B6H5 130 aa11.59□□□□□ -0.55
GTF3A-204ENST00000438571 CHTF8P0CG12 524 aa11.59□□□□□ -0.55
GTF3A-204ENST00000438571 TNXBP22105 4242 aa11.59□□□□□ -0.55
GTF3A-204ENST00000438571 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
GTF3A-204ENST00000438571 RASL11AQ6T310 242 aa11.58□□□□□ -0.56
GTF3A-204ENST00000438571 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
GTF3A-204ENST00000438571 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.56
GTF3A-204ENST00000438571 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
GTF3A-204ENST00000438571 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
GTF3A-204ENST00000438571 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
GTF3A-204ENST00000438571 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
GTF3A-204ENST00000438571 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
GTF3A-204ENST00000438571 CACNG7P62955 275 aa11.57□□□□□ -0.56
GTF3A-204ENST00000438571 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
GTF3A-204ENST00000438571 H7C1H1 209 aa11.56□□□□□ -0.56
GTF3A-204ENST00000438571 GNG4P50150 75 aa11.56□□□□□ -0.56
GTF3A-204ENST00000438571 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
GTF3A-204ENST00000438571 TRAV1-1A0A0B4J248 108 aa11.55□□□□□ -0.56
GTF3A-204ENST00000438571 A0A1B0GUV1 79 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms