RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TRAV26-2A0A0B4J265 109 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 LOC100131303A0A0U1RQF7 123 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 PPBPP02775 128 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 LINC00694P0DN24 101 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 GAGE1Q13065 139 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 GAGE4Q13068 117 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 GAGE5Q13069 117 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 OR10J3Q5JRS4 329 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 NEGR1Q7Z3B1 354 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 NEXN-AS1Q8NBZ9 246 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 GNB1LQ9BYB4 327 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 APLNQ9ULZ1 77 aa7.67□□□□□ -1.18
CHD4-202ENST00000430771 P0DMU3 169 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 CKS2P33552 79 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 MRPL51Q4U2R6 128 aaKnown RBP7.66□□□□□ -1.18
CHD4-202ENST00000430771 TMEM136Q6ZRR5 245 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 ORMDL3Q8N138 153 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 ZNRF2Q8NHG8 242 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 NIT2Q9NQR4 276 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 TNFRSF18Q9Y5U5 241 aa7.66□□□□□ -1.18
CHD4-202ENST00000430771 D6R8Y8 96 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 NCR2O95944 276 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 UBE2D3P61077 147 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 UBE2D2P62837 147 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 YPEL4Q96NS1 127 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 LAMTOR2Q9Y2Q5 125 aa7.65□□□□□ -1.18
CHD4-202ENST00000430771 CSMD3Q7Z407 3707 aa7.65□□□□□ -1.19
CHD4-202ENST00000430771 PHOX2AO14813 284 aa7.64□□□□□ -1.19
CHD4-202ENST00000430771 APCSP02743 223 aa7.64□□□□□ -1.19
CHD4-202ENST00000430771 CCL18P55774 89 aa7.64□□□□□ -1.19
CHD4-202ENST00000430771 TMEM97Q5BJF2 176 aa7.64□□□□□ -1.19
CHD4-202ENST00000430771 DAZ4Q86SG3 579 aaKnown RBP7.64□□□□□ -1.19
CHD4-202ENST00000430771 RPL39LQ96EH5 51 aaKnown RBP7.64□□□□□ -1.19
CHD4-202ENST00000430771 ST20Q9HBF5 79 aa7.64□□□□□ -1.19
CHD4-202ENST00000430771 DAZ3Q9NR90 486 aaKnown RBP7.64□□□□□ -1.19
CHD4-202ENST00000430771 PLECQ15149 4684 aaKnown RBP7.64□□□□□ -1.19
CHD4-202ENST00000430771 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 TRBV6-5A0A0K0K1A5 114 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 SMKR1H3BMG3 65 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 SCO1O75880 301 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 TIRAPP58753 221 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 MRPL18Q9H0U6 180 aaKnown RBP7.63□□□□□ -1.19
CHD4-202ENST00000430771 GTSF1LQ9H1H1 148 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 TRAPPC1Q9Y5R8 145 aa7.63□□□□□ -1.19
CHD4-202ENST00000430771 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
CHD4-202ENST00000430771 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
CHD4-202ENST00000430771 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
CHD4-202ENST00000430771 NRACQ8N912 160 aa7.62□□□□□ -1.19
CHD4-202ENST00000430771 PRELID3AQ96N28 172 aa7.62□□□□□ -1.19
CHD4-202ENST00000430771 C20orf78Q9BR46 151 aa7.62□□□□□ -1.19
CHD4-202ENST00000430771 TNFRSF6BO95407 300 aa7.61□□□□□ -1.19
CHD4-202ENST00000430771 NPYP01303 97 aa7.61□□□□□ -1.19
CHD4-202ENST00000430771 FABP9Q0Z7S8 132 aa7.61□□□□□ -1.19
CHD4-202ENST00000430771 TMEM70Q9BUB7 260 aa7.61□□□□□ -1.19
CHD4-202ENST00000430771 MAP1LC3AQ9H492 121 aa7.61□□□□□ -1.19
CHD4-202ENST00000430771 Q9UF83 564 aa7.61□□□□□ -1.19
CHD4-202ENST00000430771 MRPS16Q9Y3D3 137 aaKnown RBP7.61□□□□□ -1.19
CHD4-202ENST00000430771 TRAV8-6A0A0B4J262 113 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 IGHV3-38A0A0C4DH36 116 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 I3L3M4 83 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 GAS8-AS1O95177 125 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 RPL32P62910 135 aaKnown RBP7.6□□□□□ -1.19
CHD4-202ENST00000430771 COTL1Q14019 142 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 LELP1Q5T871 98 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 LGALS9CQ6DKI2 356 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 LYPD5Q6UWN5 251 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 UPK3BQ9BT76 320 aa7.6□□□□□ -1.19
CHD4-202ENST00000430771 TRBV25-1A0A075B6N4 114 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 TRBV27A0A0K0K1C4 114 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 TCAPO15273 167 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 RAB5AP20339 215 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 PMCHP20382 165 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 ESRGQ1W209 222 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 KIAA1644Q3SXP7 199 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 LINC00476Q8WZB0 136 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 KIR2DL4Q99706 377 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 LINC00588Q9Y4M8 146 aa7.59□□□□□ -1.19
CHD4-202ENST00000430771 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
CHD4-202ENST00000430771 COLCA2A8K830 154 aa7.58□□□□□ -1.2
CHD4-202ENST00000430771 VCYO14598 125 aa7.58□□□□□ -1.2
CHD4-202ENST00000430771 POLR2KP53803 58 aaKnown RBP7.58□□□□□ -1.2
CHD4-202ENST00000430771 PKIAP61925 76 aa7.58□□□□□ -1.2
CHD4-202ENST00000430771 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
CHD4-202ENST00000430771 LY6G6CO95867 125 aa7.57□□□□□ -1.2
CHD4-202ENST00000430771 FCER1GP30273 86 aa7.57□□□□□ -1.2
CHD4-202ENST00000430771 AMTP48728 403 aa7.57□□□□□ -1.2
CHD4-202ENST00000430771 ALKBH7Q9BT30 221 aaPredicted RBP7.57□□□□□ -1.2
CHD4-202ENST00000430771 NXT2Q9NPJ8 142 aaKnown RBP7.57□□□□□ -1.2
CHD4-202ENST00000430771 PRSS47A8MTI9 375 aa7.56□□□□□ -1.2
CHD4-202ENST00000430771 UBE2L6O14933 153 aa7.56□□□□□ -1.2
CHD4-202ENST00000430771 IQCJQ1A5X6 159 aa7.56□□□□□ -1.2
CHD4-202ENST00000430771 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
CHD4-202ENST00000430771 LOC389332A0A1B0GUA5 103 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms