RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 NRXN2Q9P2S2 1712 aa12.81□□□□□ -0.36
RIF1-204ENST00000430328 LOXP28300 417 aaPredicted RBP12.81□□□□□ -0.36
RIF1-204ENST00000430328 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
RIF1-204ENST00000430328 ZFAND3Q9H8U3 227 aa12.81□□□□□ -0.36
RIF1-204ENST00000430328 TPSG1Q9NRR2 321 aa12.81□□□□□ -0.36
RIF1-204ENST00000430328 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
RIF1-204ENST00000430328 TRBV27A0A0K0K1C4 114 aa12.8□□□□□ -0.36
RIF1-204ENST00000430328 LINC00173Q6ZV60 143 aa12.8□□□□□ -0.36
RIF1-204ENST00000430328 Q8NFD4 153 aa12.8□□□□□ -0.36
RIF1-204ENST00000430328 RNF138Q8WVD3 245 aa12.8□□□□□ -0.36
RIF1-204ENST00000430328 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
RIF1-204ENST00000430328 KLK5Q9Y337 293 aaPredicted RBP12.79□□□□□ -0.36
RIF1-204ENST00000430328 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.79□□□□□ -0.36
RIF1-204ENST00000430328 FAM222AQ5U5X8 452 aa12.79□□□□□ -0.36
RIF1-204ENST00000430328 IMUPQ9GZP8 106 aa12.79□□□□□ -0.36
RIF1-204ENST00000430328 Q8N9W7 124 aa12.79□□□□□ -0.36
RIF1-204ENST00000430328 Q8TCH9 128 aa12.79□□□□□ -0.36
RIF1-204ENST00000430328 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
RIF1-204ENST00000430328 SPRY2O43597 315 aa12.78□□□□□ -0.36
RIF1-204ENST00000430328 ODF1Q14990 250 aa12.78□□□□□ -0.36
RIF1-204ENST00000430328 UFSP1Q6NVU6 142 aa12.78□□□□□ -0.36
RIF1-204ENST00000430328 GP9P14770 177 aa12.77□□□□□ -0.36
RIF1-204ENST00000430328 GTSF1Q8WW33 167 aa12.77□□□□□ -0.36
RIF1-204ENST00000430328 SP5Q6BEB4 398 aaPredicted RBP12.77□□□□□ -0.36
RIF1-204ENST00000430328 A0A096LNI7 61 aa12.77□□□□□ -0.37
RIF1-204ENST00000430328 SMIM26A0A096LP01 95 aa12.77□□□□□ -0.37
RIF1-204ENST00000430328 FAM208BQ5VWN6 2430 aa12.76□□□□□ -0.37
RIF1-204ENST00000430328 LRCOL1A6NCL2 159 aa12.76□□□□□ -0.37
RIF1-204ENST00000430328 ESM1Q9NQ30 184 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 VPREB3Q9UKI3 123 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 IGHV4-31P0DP07 118 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 MRPS36P82909 103 aaKnown RBP12.75□□□□□ -0.37
RIF1-204ENST00000430328 NFE4Q86UQ8 179 aa12.75□□□□□ -0.37
RIF1-204ENST00000430328 LRRC75A-AS1Q8N1F1 130 aa12.74□□□□□ -0.37
RIF1-204ENST00000430328 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
RIF1-204ENST00000430328 DEFB136Q30KP8 78 aa12.74□□□□□ -0.37
RIF1-204ENST00000430328 C1orf158Q8N1D5 194 aa12.74□□□□□ -0.37
RIF1-204ENST00000430328 WT1P19544 449 aaPredicted RBP12.74□□□□□ -0.37
RIF1-204ENST00000430328 IGHV4-38-2P0DP08 117 aa12.73□□□□□ -0.37
RIF1-204ENST00000430328 IGKV2-24A0A0C4DH68 120 aa12.73□□□□□ -0.37
RIF1-204ENST00000430328 PRYO14603 147 aa12.73□□□□□ -0.37
RIF1-204ENST00000430328 IGKV1D-37A0A075B6S9 117 aa12.73□□□□□ -0.37
RIF1-204ENST00000430328 CCKP06307 115 aa12.73□□□□□ -0.37
RIF1-204ENST00000430328 NUP210Q8TEM1 1887 aaPredicted RBP12.73□□□□□ -0.37
RIF1-204ENST00000430328 MED14OSP0DP75 135 aa12.72□□□□□ -0.37
RIF1-204ENST00000430328 Q0VFX4 171 aa12.72□□□□□ -0.37
RIF1-204ENST00000430328 C3orf84H3BNL1 204 aa12.72□□□□□ -0.37
RIF1-204ENST00000430328 FLVCR1-AS1Q8TAF5 88 aa12.72□□□□□ -0.37
RIF1-204ENST00000430328 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
RIF1-204ENST00000430328 A0A087WZ39 114 aa12.72□□□□□ -0.37
RIF1-204ENST00000430328 COX7CP15954 63 aa12.71□□□□□ -0.37
RIF1-204ENST00000430328 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
RIF1-204ENST00000430328 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
RIF1-204ENST00000430328 SLURP1P55000 103 aa12.71□□□□□ -0.37
RIF1-204ENST00000430328 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
RIF1-204ENST00000430328 FAM19A1Q7Z5A9 133 aa12.71□□□□□ -0.38
RIF1-204ENST00000430328 MDFICQ9P1T7 246 aa12.71□□□□□ -0.38
RIF1-204ENST00000430328 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 Q6ZVQ6 151 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 NUPR1O60356 82 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 FOXL2NBQ6ZUU3 175 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 FHL1Q13642 323 aa12.7□□□□□ -0.38
RIF1-204ENST00000430328 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
RIF1-204ENST00000430328 SIRPDQ9H106 197 aa12.69□□□□□ -0.38
RIF1-204ENST00000430328 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
RIF1-204ENST00000430328 ADAMTS9Q9P2N4 1935 aa12.68□□□□□ -0.38
RIF1-204ENST00000430328 UBE2D4Q9Y2X8 147 aa12.68□□□□□ -0.38
RIF1-204ENST00000430328 A0A0J9YXY3 114 aa12.67□□□□□ -0.38
RIF1-204ENST00000430328 CTRLP40313 264 aa12.67□□□□□ -0.38
RIF1-204ENST00000430328 B3GALT5-AS1P59052 145 aa12.67□□□□□ -0.38
RIF1-204ENST00000430328 SLPIP03973 132 aa12.67□□□□□ -0.38
RIF1-204ENST00000430328 SPINK6Q6UWN8 80 aa12.67□□□□□ -0.38
RIF1-204ENST00000430328 LINC00694P0DN24 101 aa12.67□□□□□ -0.38
RIF1-204ENST00000430328 M0QXV9 152 aa12.66□□□□□ -0.38
RIF1-204ENST00000430328 Q6ZS92 163 aa12.66□□□□□ -0.38
RIF1-204ENST00000430328 HRCT1Q6UXD1 115 aa12.66□□□□□ -0.38
RIF1-204ENST00000430328 SPRY4Q9C004 299 aa12.66□□□□□ -0.38
RIF1-204ENST00000430328 WFDC13Q8IUB5 93 aa12.66□□□□□ -0.38
RIF1-204ENST00000430328 FAM30AQ9NZY2 134 aa12.66□□□□□ -0.38
RIF1-204ENST00000430328 TMEM223A0PJW6 202 aa12.65□□□□□ -0.38
RIF1-204ENST00000430328 IGKV1-17P01599 117 aa12.65□□□□□ -0.38
RIF1-204ENST00000430328 MIFP14174 115 aa12.65□□□□□ -0.38
RIF1-204ENST00000430328 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.39
RIF1-204ENST00000430328 DIAPH2-AS1Q14236 149 aa12.65□□□□□ -0.39
RIF1-204ENST00000430328 PRO0255Q9UI72 69 aa12.64□□□□□ -0.39
RIF1-204ENST00000430328 TRBV6-1A0A0K0K1D8 114 aa12.64□□□□□ -0.39
RIF1-204ENST00000430328 P0DMU3 169 aa12.64□□□□□ -0.39
RIF1-204ENST00000430328 FAM231AP0DMU4 169 aa12.64□□□□□ -0.39
RIF1-204ENST00000430328 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
RIF1-204ENST00000430328 PLXNA4Q9HCM2 1894 aa12.64□□□□□ -0.39
RIF1-204ENST00000430328 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
RIF1-204ENST00000430328 ZFAND2AQ8N6M9 145 aa12.63□□□□□ -0.39
RIF1-204ENST00000430328 C2orf70A6NJV1 201 aa12.63□□□□□ -0.39
RIF1-204ENST00000430328 UBE2D1P51668 147 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms