RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 LRBAP50851 2863 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 F5H697 171 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 RNASE3P12724 160 aaKnown RBP11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 RHOHQ15669 191 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
SH2D3C-206ENST00000429553 VCYO14598 125 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 PPP1R17O96001 155 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 C15orf32Q32M92 178 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 FAM215AQ9Y5M1 114 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 KIF25-AS1Q9Y6Z4 181 aa11.27□□□□□ -0.61
SH2D3C-206ENST00000429553 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 C4orf26Q17RF5 130 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 NPBQ8NG41 125 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 A8MZ25 164 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 OVOL1O14753 267 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 OXTP01178 125 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 ACACAQ13085 2346 aa11.26□□□□□ -0.61
SH2D3C-206ENST00000429553 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 RPS28P62857 69 aaKnown RBP11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 NSUN5P1Q3KNT7 163 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 VMO1Q7Z5L0 202 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 A0A087WW49 117 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 RS1O15537 224 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 ACYP1P07311 99 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 CRYGAP11844 174 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 DAND5Q8N907 189 aa11.25□□□□□ -0.61
SH2D3C-206ENST00000429553 A0A0J9YX75 114 aa11.24□□□□□ -0.61
SH2D3C-206ENST00000429553 CLEC19AQ6UXS0 136 aa11.24□□□□□ -0.61
SH2D3C-206ENST00000429553 DSCR8Q96T75 97 aa11.24□□□□□ -0.61
SH2D3C-206ENST00000429553 ASH1LQ9NR48 2969 aaKnown RBP11.23□□□□□ -0.61
SH2D3C-206ENST00000429553 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
SH2D3C-206ENST00000429553 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
SH2D3C-206ENST00000429553 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
SH2D3C-206ENST00000429553 RNASE6Q93091 150 aaKnown RBP11.23□□□□□ -0.61
SH2D3C-206ENST00000429553 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
SH2D3C-206ENST00000429553 F6UB75 175 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 HRCT1Q6UXD1 115 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 DPH3Q96FX2 82 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 DYNLRB1Q9NP97 96 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 F5H768 121 aa11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
SH2D3C-206ENST00000429553 TRBV27A0A0K0K1C4 114 aa11.21□□□□□ -0.61
SH2D3C-206ENST00000429553 TRACP01848 142 aa11.21□□□□□ -0.61
SH2D3C-206ENST00000429553 ECSCRQ19T08 205 aa11.21□□□□□ -0.61
SH2D3C-206ENST00000429553 B9A039 149 aa11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 K7ENP7 123 aa11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 ATP5G1P05496 136 aa11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 MIAQ16674 131 aa11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 DAZ1Q9NQZ3 744 aaKnown RBP11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 NDUFA12Q9UI09 145 aa11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 SPTBN1Q01082 2364 aaKnown RBP11.21□□□□□ -0.62
SH2D3C-206ENST00000429553 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
SH2D3C-206ENST00000429553 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
SH2D3C-206ENST00000429553 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
SH2D3C-206ENST00000429553 Q8NA96 180 aa11.2□□□□□ -0.62
SH2D3C-206ENST00000429553 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
SH2D3C-206ENST00000429553 IGHV7-81A0A0B4J1V7 117 aa11.19□□□□□ -0.62
SH2D3C-206ENST00000429553 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
SH2D3C-206ENST00000429553 M0R1W7 72 aa11.19□□□□□ -0.62
SH2D3C-206ENST00000429553 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
SH2D3C-206ENST00000429553 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
SH2D3C-206ENST00000429553 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
SH2D3C-206ENST00000429553 SDIM1Q6ZPB5 146 aa11.18□□□□□ -0.62
SH2D3C-206ENST00000429553 KLRB1Q12918 225 aa11.18□□□□□ -0.62
SH2D3C-206ENST00000429553 ITLN2Q8WWU7 325 aaPredicted RBP11.18□□□□□ -0.62
SH2D3C-206ENST00000429553 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
SH2D3C-206ENST00000429553 CITED2Q99967 270 aaPredicted RBP11.18□□□□□ -0.62
SH2D3C-206ENST00000429553 TIRAPP58753 221 aa11.17□□□□□ -0.62
SH2D3C-206ENST00000429553 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
SH2D3C-206ENST00000429553 LENEPQ9Y5L5 61 aa11.17□□□□□ -0.62
SH2D3C-206ENST00000429553 IGKV3-7A0A075B6H7 116 aa11.17□□□□□ -0.62
SH2D3C-206ENST00000429553 CXCL5P42830 114 aa11.17□□□□□ -0.62
SH2D3C-206ENST00000429553 PTPRQQ9UMZ3 2332 aa11.17□□□□□ -0.62
SH2D3C-206ENST00000429553 ATOX1O00244 68 aa11.16□□□□□ -0.62
SH2D3C-206ENST00000429553 NXPH4O95158 308 aa11.16□□□□□ -0.62
SH2D3C-206ENST00000429553 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
SH2D3C-206ENST00000429553 FAM19A4Q96LR4 140 aa11.16□□□□□ -0.62
SH2D3C-206ENST00000429553 MED14OSP0DP75 135 aa11.16□□□□□ -0.62
SH2D3C-206ENST00000429553 Q5XG85 94 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms