RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 AGPAT4-IT1Q9H0P7 198 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 Q8N1Y9 231 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 PROK2Q9HC23 129 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 TRBV24-1A0A075B6N3 115 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 LTBP1Q14766 1721 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 GREB1Q4ZG55 1949 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 PRYO14603 147 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
HERC4-206ENST00000427635 FXYD5Q96DB9 178 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 LCTP09848 1927 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 GBF1Q92538 1859 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 NPYP01303 97 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 TMEM61Q8N0U2 210 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 LINC00269Q8N2A0 174 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
HERC4-206ENST00000427635 MYLKQ15746 1914 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 WDR81Q562E7 1941 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 TNP2Q05952 138 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 LINC00337Q8N6G1 96 aa4.39□□□□□ -1.71
HERC4-206ENST00000427635 NCKAP5O14513 1909 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 H7C423 109 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 PDE6GP18545 87 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 IGLV11-55A0A075B6I3 123 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 TRBV10-1A0A0K0K1A3 114 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 ZNF295-AS1Q8N0V1 137 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 PLAC8L1A1L4L8 177 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 E9PLD3 99 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BKO60814 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BJP06899 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BOP23527 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BBP33778 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BDP58876 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BCP62807 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST2H2BEQ16778 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 FBXL19-AS1Q494R0 122 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BHQ93079 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 SIP14410 1827 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 TRBV6-1A0A0K0K1D8 114 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 IGLC7A0M8Q6 106 aa4.38□□□□□ -1.71
HERC4-206ENST00000427635 ABCA12Q86UK0 2595 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 SRSF3P84103 164 aaKnown RBP4.37□□□□□ -1.71
HERC4-206ENST00000427635 Q8NA96 180 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 ZNF581Q9P0T4 197 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 CCDC168Q8NDH2 2452 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 COL4A6Q14031 1691 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 FANCMQ8IYD8 2048 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 LGALS9O00182 355 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 CFC1P0CG37 223 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
HERC4-206ENST00000427635 A0A0B4J2C4 111 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 CHCHD10Q8WYQ3 142 aaPredicted RBP4.37□□□□□ -1.71
HERC4-206ENST00000427635 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
HERC4-206ENST00000427635 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 ZNF503-AS2A6NEH8 195 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 NUP214P35658 2090 aaPredicted RBP4.37□□□□□ -1.71
HERC4-206ENST00000427635 CXCL1P09341 107 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 LINC00482Q8N8I6 264 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 DENND4AQ7Z401 1863 aa4.37□□□□□ -1.71
HERC4-206ENST00000427635 NHLRC4P0CG21 123 aaPredicted RBP4.36□□□□□ -1.71
HERC4-206ENST00000427635 FLNBO75369 2602 aaKnown RBP4.36□□□□□ -1.71
HERC4-206ENST00000427635 SNRNP200O75643 2136 aaKnown RBP4.36□□□□□ -1.71
HERC4-206ENST00000427635 TANC1Q9C0D5 1861 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 LYPD6Q86Y78 171 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 A0A0J9YWU9 116 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 C9orf118A6NHY6 69 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 H3BMG7 143 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 I3L2K1 104 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 ZFAND2AQ8N6M9 145 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 PRO3102Q9H379 93 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 PTPRFP10586 1907 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 C19orf84I3L1E1 186 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 RPL28P46779 137 aaKnown RBP4.36□□□□□ -1.71
HERC4-206ENST00000427635 BEAN1Q3B7T3 259 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 Q6ZRM9 215 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 Q6ZVQ6 151 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 ARHGEF17Q96PE2 2063 aaPredicted RBP4.36□□□□□ -1.71
HERC4-206ENST00000427635 TMEM131Q92545 1883 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 DOPEY2Q9Y3R5 2298 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 BPY2O14599 106 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 MIAQ16674 131 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 TDRG1Q3Y452 100 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 Q6ZUT4 128 aa4.36□□□□□ -1.71
HERC4-206ENST00000427635 MYO7BQ6PIF6 2116 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 AKAP6Q13023 2319 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 UQCRQO14949 82 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 SPTBP11277 2137 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 TEX49A0A1B0GTD5 131 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 LECT2O14960 151 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms