RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 IGHV3-30-5P0DP03 117 aa11.59□□□□□ -0.55
LMCD1-204ENST00000426878 DPH3P1Q9H4G8 78 aa11.59□□□□□ -0.55
LMCD1-204ENST00000426878 PEA15Q15121 130 aa11.58□□□□□ -0.56
LMCD1-204ENST00000426878 TWIST1Q15672 202 aa11.58□□□□□ -0.56
LMCD1-204ENST00000426878 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
LMCD1-204ENST00000426878 NIT1Q86X76 327 aa11.58□□□□□ -0.56
LMCD1-204ENST00000426878 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.58□□□□□ -0.56
LMCD1-204ENST00000426878 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
LMCD1-204ENST00000426878 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
LMCD1-204ENST00000426878 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
LMCD1-204ENST00000426878 TRBV6-8A0A0A6YYG3 113 aa11.57□□□□□ -0.56
LMCD1-204ENST00000426878 C9JQL5 133 aa11.57□□□□□ -0.56
LMCD1-204ENST00000426878 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
LMCD1-204ENST00000426878 CHCHD7Q9BUK0 85 aa11.57□□□□□ -0.56
LMCD1-204ENST00000426878 LRP1BQ9NZR2 4599 aa11.57□□□□□ -0.56
LMCD1-204ENST00000426878 KIAA1109Q2LD37 5005 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 FAM231BA6NCW3 169 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 MGPP08493 103 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 TMEM97Q5BJF2 176 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 SPATA12Q7Z6I5 190 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 Q8N3U1 123 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 GFRA4Q9GZZ7 299 aa11.56□□□□□ -0.56
LMCD1-204ENST00000426878 EREGO14944 169 aa11.55□□□□□ -0.56
LMCD1-204ENST00000426878 SRSF3P84103 164 aaKnown RBP11.55□□□□□ -0.56
LMCD1-204ENST00000426878 A0A087WTM6 91 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 TSKUQ8WUA8 353 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 URGCP-MRPS24S4R325 110 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 DNAH5Q8TE73 4624 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 HERC2O95714 4834 aa11.54□□□□□ -0.56
LMCD1-204ENST00000426878 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
LMCD1-204ENST00000426878 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
LMCD1-204ENST00000426878 FRZBQ92765 325 aa11.53□□□□□ -0.56
LMCD1-204ENST00000426878 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
LMCD1-204ENST00000426878 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
LMCD1-204ENST00000426878 NAT8Q9UHE5 227 aa11.53□□□□□ -0.56
LMCD1-204ENST00000426878 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.56
LMCD1-204ENST00000426878 NTM-AS1Q6ZSK4 140 aa11.52□□□□□ -0.56
LMCD1-204ENST00000426878 SMIM15Q7Z3B0 74 aa11.52□□□□□ -0.56
LMCD1-204ENST00000426878 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.56
LMCD1-204ENST00000426878 Q9HAA7 133 aa11.52□□□□□ -0.56
LMCD1-204ENST00000426878 NIT2Q9NQR4 276 aa11.52□□□□□ -0.56
LMCD1-204ENST00000426878 PGPEP1Q9NXJ5 209 aa11.52□□□□□ -0.56
LMCD1-204ENST00000426878 A0A087WX48 190 aa11.52□□□□□ -0.57
LMCD1-204ENST00000426878 HIGD1CA8MV81 97 aa11.52□□□□□ -0.57
LMCD1-204ENST00000426878 PKIAP61925 76 aa11.52□□□□□ -0.57
LMCD1-204ENST00000426878 ELOBQ15370 118 aa11.52□□□□□ -0.57
LMCD1-204ENST00000426878 TM2D2Q9BX73 214 aa11.52□□□□□ -0.57
LMCD1-204ENST00000426878 V9GYV3 84 aa11.52□□□□□ -0.57
LMCD1-204ENST00000426878 PSCAO43653 123 aa11.51□□□□□ -0.57
LMCD1-204ENST00000426878 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
LMCD1-204ENST00000426878 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 RAB14P61106 215 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 CDPF1Q6NVV7 123 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 GATD1Q8NB37 220 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 BORCS7Q96B45 105 aa11.5□□□□□ -0.57
LMCD1-204ENST00000426878 ADIRFQ15847 76 aa11.49□□□□□ -0.57
LMCD1-204ENST00000426878 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
LMCD1-204ENST00000426878 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
LMCD1-204ENST00000426878 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
LMCD1-204ENST00000426878 CHCHD5Q9BSY4 110 aa11.48□□□□□ -0.57
LMCD1-204ENST00000426878 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
LMCD1-204ENST00000426878 IGHV1-24A0A0C4DH33 117 aa11.47□□□□□ -0.57
LMCD1-204ENST00000426878 RMI2Q96E14 147 aa11.47□□□□□ -0.57
LMCD1-204ENST00000426878 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
LMCD1-204ENST00000426878 CDK2AP2O75956 126 aa11.46□□□□□ -0.57
LMCD1-204ENST00000426878 MPV17L2Q567V2 206 aa11.46□□□□□ -0.57
LMCD1-204ENST00000426878 ATRAIDQ6UW56 229 aa11.46□□□□□ -0.57
LMCD1-204ENST00000426878 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
LMCD1-204ENST00000426878 HSPG2P98160 4391 aa11.45□□□□□ -0.58
LMCD1-204ENST00000426878 TRAV26-2A0A0B4J265 109 aa11.45□□□□□ -0.58
LMCD1-204ENST00000426878 Q0VG73 95 aa11.45□□□□□ -0.58
LMCD1-204ENST00000426878 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
LMCD1-204ENST00000426878 NAT8BQ9UHF3 227 aa11.45□□□□□ -0.58
LMCD1-204ENST00000426878 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
LMCD1-204ENST00000426878 RIGQ13278 110 aa11.44□□□□□ -0.58
LMCD1-204ENST00000426878 CLLU1Q5K131 121 aa11.44□□□□□ -0.58
LMCD1-204ENST00000426878 APOBP04114 4563 aaKnown RBP11.44□□□□□ -0.58
LMCD1-204ENST00000426878 RYR1P21817 5038 aa11.44□□□□□ -0.58
LMCD1-204ENST00000426878 NTN5Q8WTR8 489 aaPredicted RBP11.43□□□□□ -0.58
LMCD1-204ENST00000426878 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 RBX1P62877 108 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 COTL1Q14019 142 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 ENHOQ6UWT2 76 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 Q8N814 137 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 Q8N976 141 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 RPL39LQ96EH5 51 aaKnown RBP11.43□□□□□ -0.58
LMCD1-204ENST00000426878 TMEM243Q9BU79 118 aa11.43□□□□□ -0.58
LMCD1-204ENST00000426878 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
LMCD1-204ENST00000426878 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
LMCD1-204ENST00000426878 ANGP03950 147 aaKnown RBP11.42□□□□□ -0.58
LMCD1-204ENST00000426878 GAGE6Q13070 117 aa11.42□□□□□ -0.58
LMCD1-204ENST00000426878 RNF185Q96GF1 192 aa11.42□□□□□ -0.58
LMCD1-204ENST00000426878 PRR34Q9NV39 138 aa11.42□□□□□ -0.58
LMCD1-204ENST00000426878 NCR2O95944 276 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms