RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OR7C2O60412 319 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 VPREB1P12018 145 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 BCAP31P51572 246 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 ZFP69Q49AA0 526 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 FAM74A1Q5RGS3 127 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 EIF5AL1Q6IS14 154 aaKnown RBP3.75□□□□□ -1.81
SDCBP-203ENST00000424270 C15orf56Q8N910 161 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 C15orf40Q8WUR7 153 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 PTH2Q96A98 100 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 DIRAS2Q96HU8 199 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 SMIM8Q96KF7 97 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 CARD19Q96LW7 228 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 GGACTQ9BVM4 153 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 SLC25A2Q9BXI2 301 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 KRTAP9-3Q9BYQ3 159 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 NUDT15Q9NV35 164 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 TRAV6A0A075B6T7 132 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 UBE2L5PA0A1B0GUS4 154 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 FAM240BA0A1B0GVZ2 78 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 UBE2L3P68036 154 aaKnown RBP3.74□□□□□ -1.81
SDCBP-203ENST00000424270 ZNF56Q15929 161 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 TMEM97Q5BJF2 176 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 TMEM14EPQ6UXP3 125 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 LINC00173Q6ZV60 143 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 GOLT1AQ6ZVE7 132 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 PHF5AQ7RTV0 110 aaKnown RBP3.74□□□□□ -1.81
SDCBP-203ENST00000424270 SLC7A5P1Q8MH63 180 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 OR11H4Q8NGC9 324 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 TMED6Q8WW62 240 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 DERL1Q9BUN8 251 aa3.74□□□□□ -1.81
SDCBP-203ENST00000424270 LYRM2Q9NU23 88 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-203ENST00000424270 M0R381 172 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 RGS5O15539 181 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 GCGP01275 180 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 RNASE3P12724 160 aaKnown RBP3.73□□□□□ -1.81
SDCBP-203ENST00000424270 FGF7P21781 194 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 IFITM3Q01628 133 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 MIR17HGQ75NE6 70 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 SGK494Q96LW2 274 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 UQCC1Q9NVA1 299 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 OR5AC2Q9NZP5 309 aa3.73□□□□□ -1.81
SDCBP-203ENST00000424270 CARHSP1Q9Y2V2 147 aaKnown RBP3.73□□□□□ -1.81
SDCBP-203ENST00000424270 IGHV1-24A0A0C4DH33 117 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 LOC107984640A0A0U1RRK4 108 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 A0A1W2PNN7 141 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 F5H697 171 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 H3BVH4 76 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 UBE2L6O14933 153 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 KRTAP1-4P0C5Y4 121 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 RPL29P47914 159 aaKnown RBP3.72□□□□□ -1.81
SDCBP-203ENST00000424270 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
SDCBP-203ENST00000424270 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
SDCBP-203ENST00000424270 SSBP1Q04837 148 aaKnown RBP3.72□□□□□ -1.81
SDCBP-203ENST00000424270 PYDC2Q56P42 97 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 TMEM128Q5BJH2 165 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 C9orf116Q5BN46 136 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-203ENST00000424270 GCSAMLQ5JQS6 135 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 TSKUQ8WUA8 353 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 MITD1Q8WV92 249 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 FXYD5Q96DB9 178 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 PPDPFQ9H3Y8 114 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 GSKIPQ9P0R6 139 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 C11orf21Q9P2W6 132 aa3.72□□□□□ -1.81
SDCBP-203ENST00000424270 GVQW2A0A096LPI5 108 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-203ENST00000424270 PCP4L1A6NKN8 68 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 CST7O76096 145 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 UBE2BP63146 152 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 PIK3CD-AS1Q5SR53 167 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 UFSP1Q6NVU6 142 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 AQP10Q96PS8 301 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 SDHCQ99643 169 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-203ENST00000424270 CBY1Q9Y3M2 126 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 V9GYH0 126 aa3.71□□□□□ -1.82
SDCBP-203ENST00000424270 B5MCH6 92 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 SFT2D2O95562 160 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 FGF6P10767 208 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 IL7P13232 177 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 TPT1P13693 172 aaKnown RBP3.7□□□□□ -1.82
SDCBP-203ENST00000424270 ZNF80P51504 273 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-203ENST00000424270 TAS2R30P59541 319 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 SSTP61278 116 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 MRPS10P82664 201 aaKnown RBP3.7□□□□□ -1.82
SDCBP-203ENST00000424270 SYCNQ0VAF6 134 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 ASB16-AS1Q495Z4 193 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 TRIQKQ629K1 86 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 C20orf203Q8NBC4 194 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 NEXN-AS1Q8NBZ9 246 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 ISOC2Q96AB3 205 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 TVP23CQ96ET8 276 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 SFRP2Q96HF1 295 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 OTORQ9NRC9 128 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 WDR83OSQ9Y284 106 aa3.7□□□□□ -1.82
SDCBP-203ENST00000424270 IGLV4-60A0A075B6I1 120 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 TRBV6-1A0A0K0K1D8 114 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 CENPXA8MT69 81 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms