RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 HIST1H2BNQ99877 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BMQ99879 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 NPYP01303 97 aa15.15■□□□□ 0.02
ABCF3-202ENST00000421340 RPL32P62910 135 aaKnown RBP15.15■□□□□ 0.02
ABCF3-202ENST00000421340 Q0VG73 95 aa15.15■□□□□ 0.02
ABCF3-202ENST00000421340 Q6ZTC4 211 aa15.15■□□□□ 0.02
ABCF3-202ENST00000421340 PRADC1Q9BSG0 188 aa15.15■□□□□ 0.02
ABCF3-202ENST00000421340 TENM3Q9P273 2699 aa15.14■□□□□ 0.01
ABCF3-202ENST00000421340 F5H768 121 aa15.14■□□□□ 0.01
ABCF3-202ENST00000421340 C18orf32Q8TCD1 76 aa15.14■□□□□ 0.01
ABCF3-202ENST00000421340 RPL39LQ96EH5 51 aaKnown RBP15.14■□□□□ 0.01
ABCF3-202ENST00000421340 ST20Q9HBF5 79 aa15.14■□□□□ 0.01
ABCF3-202ENST00000421340 DNAH9Q9NYC9 4486 aa15.14■□□□□ 0.01
ABCF3-202ENST00000421340 HUWE1Q7Z6Z7 4374 aaKnown RBP15.13■□□□□ 0.01
ABCF3-202ENST00000421340 SUMO2P61956 95 aaKnown RBP15.13■□□□□ 0.01
ABCF3-202ENST00000421340 NEXN-AS1Q8NBZ9 246 aa15.13■□□□□ 0.01
ABCF3-202ENST00000421340 MAP1LC3AQ9H492 121 aa15.13■□□□□ 0.01
ABCF3-202ENST00000421340 TNFRSF18Q9Y5U5 241 aa15.13■□□□□ 0.01
ABCF3-202ENST00000421340 NACAE9PAV3 2078 aa15.12■□□□□ 0.01
ABCF3-202ENST00000421340 H3BNG1 76 aa15.12■□□□□ 0.01
ABCF3-202ENST00000421340 TRBV7-3A0A075B6L6 115 aa15.11■□□□□ 0.01
ABCF3-202ENST00000421340 TRAV10A0A0B4J240 114 aa15.11■□□□□ 0.01
ABCF3-202ENST00000421340 PAX4O43316 350 aa15.11■□□□□ 0.01
ABCF3-202ENST00000421340 P0DMU3 169 aa15.11■□□□□ 0.01
ABCF3-202ENST00000421340 FAM231AP0DMU4 169 aa15.11■□□□□ 0.01
ABCF3-202ENST00000421340 FAM231CP0DMU5 169 aa15.11■□□□□ 0.01
ABCF3-202ENST00000421340 POLR2KP53803 58 aaKnown RBP15.11■□□□□ 0.01
ABCF3-202ENST00000421340 RPL36AP83881 106 aaKnown RBP15.11■□□□□ 0.01
ABCF3-202ENST00000421340 RPL36ALQ969Q0 106 aaKnown RBP15.11■□□□□ 0.01
ABCF3-202ENST00000421340 VSIG2Q96IQ7 327 aa15.1■□□□□ 0.01
ABCF3-202ENST00000421340 DEFB131BA0A096LNP1 70 aa15.09■□□□□ 0.01
ABCF3-202ENST00000421340 SDHAF1A6NFY7 115 aa15.09■□□□□ 0.01
ABCF3-202ENST00000421340 VCYO14598 125 aa15.09■□□□□ 0.01
ABCF3-202ENST00000421340 HTN3P15516 51 aa15.09■□□□□ 0.01
ABCF3-202ENST00000421340 TMEM70Q9BUB7 260 aa15.09■□□□□ 0.01
ABCF3-202ENST00000421340 NXT2Q9NPJ8 142 aaKnown RBP15.09■□□□□ 0.01
ABCF3-202ENST00000421340 Q9UF83 564 aa15.09■□□□□ 0.01
ABCF3-202ENST00000421340 TRBV27A0A0K0K1C4 114 aa15.08■□□□□ 0
ABCF3-202ENST00000421340 PMCHP20382 165 aa15.08■□□□□ 0
ABCF3-202ENST00000421340 Q8N8P6 123 aa15.08■□□□□ 0
ABCF3-202ENST00000421340 ZNRF2Q8NHG8 242 aa15.08■□□□□ 0
ABCF3-202ENST00000421340 SMIM2Q9BVW6 85 aa15.08■□□□□ 0
ABCF3-202ENST00000421340 IGLV2-18A0A075B6J9 118 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 TRAV26-1A0A087WT03 109 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 LINC00694P0DN24 101 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 UBE2D3P61077 147 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 UBE2D2P62837 147 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 COA6Q5JTJ3 125 aaKnown RBP15.07■□□□□ 0
ABCF3-202ENST00000421340 BAGE3Q86Y29 109 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 PRSS3P2Q8NHM4 247 aa15.07■□□□□ 0
ABCF3-202ENST00000421340 LOC389332A0A1B0GUA5 103 aa15.06■□□□□ 0
ABCF3-202ENST00000421340 LINC01546A6NGU7 62 aa15.06■□□□□ 0
ABCF3-202ENST00000421340 K7EMI3 77 aa15.06■□□□□ 0
ABCF3-202ENST00000421340 GYPEP15421 78 aa15.06■□□□□ 0
ABCF3-202ENST00000421340 IQCJQ1A5X6 159 aa15.06■□□□□ 0
ABCF3-202ENST00000421340 DAZ4Q86SG3 579 aaKnown RBP15.06■□□□□ 0
ABCF3-202ENST00000421340 NIT1Q86X76 327 aa15.06■□□□□ 0
ABCF3-202ENST00000421340 DAZ3Q9NR90 486 aaKnown RBP15.06■□□□□ 0
ABCF3-202ENST00000421340 GAGE12JA6NER3 117 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 I3L3M4 83 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 TCAPO15273 167 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 LINC00614P0C842 121 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 IFI27P40305 119 aaPredicted RBP15.05■□□□□ -0
ABCF3-202ENST00000421340 GAGE1Q13065 139 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 GAGE4Q13068 117 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 GAGE5Q13069 117 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 GAGE13Q4V321 117 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 SH2D6Q7Z4S9 175 aa15.05■□□□□ -0
ABCF3-202ENST00000421340 PRKDCP78527 4128 aaKnown RBP15.05■□□□□ -0
ABCF3-202ENST00000421340 LOC100131303A0A0U1RQF7 123 aa15.04■□□□□ -0
ABCF3-202ENST00000421340 MRPL23Q16540 153 aaKnown RBP15.04■□□□□ -0
ABCF3-202ENST00000421340 CHCHD1Q96BP2 118 aaKnown RBP15.04■□□□□ -0
ABCF3-202ENST00000421340 A0A0J9YY99 117 aa15.03■□□□□ -0
ABCF3-202ENST00000421340 NDUFA6P56556 154 aa15.03■□□□□ -0
ABCF3-202ENST00000421340 PHLDA1Q8WV24 401 aaPredicted RBP15.03■□□□□ -0
ABCF3-202ENST00000421340 KIR2DL4Q99706 377 aa15.03■□□□□ -0
ABCF3-202ENST00000421340 FBN3Q75N90 2809 aa15.03■□□□□ -0
ABCF3-202ENST00000421340 FA2HQ7L5A8 372 aa15.02■□□□□ -0
ABCF3-202ENST00000421340 URB1-AS1Q96HZ7 61 aa15.02■□□□□ -0
ABCF3-202ENST00000421340 ICOSQ9Y6W8 199 aa15.02■□□□□ -0
ABCF3-202ENST00000421340 S100A6P06703 90 aa15.01□□□□□ -0.01
ABCF3-202ENST00000421340 AP5S1Q9NUS5 200 aa15.01□□□□□ -0.01
ABCF3-202ENST00000421340 COL7A1Q02388 2944 aa15□□□□□ -0.01
ABCF3-202ENST00000421340 ESDP10768 282 aa15□□□□□ -0.01
ABCF3-202ENST00000421340 TMEM97Q5BJF2 176 aa15□□□□□ -0.01
ABCF3-202ENST00000421340 ATP6V0E2Q8NHE4 81 aa15□□□□□ -0.01
ABCF3-202ENST00000421340 SERF1AO75920 110 aa14.99□□□□□ -0.01
ABCF3-202ENST00000421340 GTSF1LQ9H1H1 148 aa14.99□□□□□ -0.01
ABCF3-202ENST00000421340 A0A096LPF7 62 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 TSHBP01222 138 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 LINC00310P59036 64 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 COTL1Q14019 142 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 LAGE3Q14657 143 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 ORMDL2Q53FV1 153 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 RNASEKQ6P5S7 137 aaKnown RBP14.98□□□□□ -0.01
ABCF3-202ENST00000421340 C15orf53Q8NAA6 179 aa14.98□□□□□ -0.01
ABCF3-202ENST00000421340 G0S2P27469 103 aa14.97□□□□□ -0.01
ABCF3-202ENST00000421340 FCER1GP30273 86 aa14.97□□□□□ -0.01
ABCF3-202ENST00000421340 NEGR1Q7Z3B1 354 aa14.97□□□□□ -0.01
ABCF3-202ENST00000421340 TMA7Q9Y2S6 64 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms