RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 H7C1H1 209 aa14.39□□□□□ -0.11
CPNE1-211ENST00000420363 NTF3P20783 257 aa14.39□□□□□ -0.11
CPNE1-211ENST00000420363 ERVFC1-1P60608 527 aa14.39□□□□□ -0.11
CPNE1-211ENST00000420363 FAM74A3Q4VXF1 159 aa14.39□□□□□ -0.11
CPNE1-211ENST00000420363 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-211ENST00000420363 TNFRSF18Q9Y5U5 241 aa14.39□□□□□ -0.11
CPNE1-211ENST00000420363 LRP1BQ9NZR2 4599 aa14.38□□□□□ -0.11
CPNE1-211ENST00000420363 A8MWL6 223 aa14.38□□□□□ -0.11
CPNE1-211ENST00000420363 GTSF1Q8WW33 167 aa14.38□□□□□ -0.11
CPNE1-211ENST00000420363 CHCHD7Q9BUK0 85 aa14.38□□□□□ -0.11
CPNE1-211ENST00000420363 DPH3P1Q9H4G8 78 aa14.38□□□□□ -0.11
CPNE1-211ENST00000420363 IGHV3-30P01768 117 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 IGHV3-33P01772 117 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 MGPP08493 103 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 IGHV3-30-3P0DP02 117 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 IGHV3-30-5P0DP03 117 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 DNAJC30Q96LL9 226 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 OSTCQ9NRP0 149 aa14.37□□□□□ -0.11
CPNE1-211ENST00000420363 M0QY20 66 aa14.36□□□□□ -0.11
CPNE1-211ENST00000420363 PEA15Q15121 130 aa14.36□□□□□ -0.11
CPNE1-211ENST00000420363 TMEM97Q5BJF2 176 aa14.36□□□□□ -0.11
CPNE1-211ENST00000420363 SUMO4Q6EEV6 95 aa14.36□□□□□ -0.11
CPNE1-211ENST00000420363 SPATA12Q7Z6I5 190 aa14.36□□□□□ -0.11
CPNE1-211ENST00000420363 DAZ4Q86SG3 579 aaKnown RBP14.36□□□□□ -0.11
CPNE1-211ENST00000420363 NIT1Q86X76 327 aa14.36□□□□□ -0.11
CPNE1-211ENST00000420363 DAZ3Q9NR90 486 aaKnown RBP14.36□□□□□ -0.11
CPNE1-211ENST00000420363 TRBV6-8A0A0A6YYG3 113 aa14.35□□□□□ -0.11
CPNE1-211ENST00000420363 EREGO14944 169 aa14.35□□□□□ -0.11
CPNE1-211ENST00000420363 FOXA3P55318 350 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-211ENST00000420363 TWIST1Q15672 202 aa14.35□□□□□ -0.11
CPNE1-211ENST00000420363 GFRA4Q9GZZ7 299 aa14.35□□□□□ -0.11
CPNE1-211ENST00000420363 FAM231BA6NCW3 169 aa14.34□□□□□ -0.11
CPNE1-211ENST00000420363 URGCP-MRPS24S4R325 110 aa14.34□□□□□ -0.11
CPNE1-211ENST00000420363 Q8N3U1 123 aa14.33□□□□□ -0.12
CPNE1-211ENST00000420363 TSKUQ8WUA8 353 aa14.33□□□□□ -0.12
CPNE1-211ENST00000420363 A0A087WTM6 91 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 C9JQL5 133 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 PKIAP61925 76 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 TMEM241Q24JQ0 296 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 RASL11AQ6T310 242 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 C15orf54Q8N8G6 183 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 FRZBQ92765 325 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 ISOC2Q96AB3 205 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 DNAH5Q8TE73 4624 aa14.32□□□□□ -0.12
CPNE1-211ENST00000420363 TRAV8-3A0A0A6YYJ7 113 aa14.31□□□□□ -0.12
CPNE1-211ENST00000420363 KRTAP10-2P60368 255 aa14.31□□□□□ -0.12
CPNE1-211ENST00000420363 KCNIP4Q6PIL6 250 aa14.31□□□□□ -0.12
CPNE1-211ENST00000420363 SMIM15Q7Z3B0 74 aa14.31□□□□□ -0.12
CPNE1-211ENST00000420363 Q9HAA7 133 aa14.31□□□□□ -0.12
CPNE1-211ENST00000420363 NAT8Q9UHE5 227 aa14.31□□□□□ -0.12
CPNE1-211ENST00000420363 A0A087WX48 190 aa14.3□□□□□ -0.12
CPNE1-211ENST00000420363 RPL23P62829 140 aaKnown RBP14.3□□□□□ -0.12
CPNE1-211ENST00000420363 SRSF3P84103 164 aaKnown RBP14.3□□□□□ -0.12
CPNE1-211ENST00000420363 CDPF1Q6NVV7 123 aa14.3□□□□□ -0.12
CPNE1-211ENST00000420363 Q8N1X5 172 aa14.3□□□□□ -0.12
CPNE1-211ENST00000420363 BORCS7Q96B45 105 aa14.3□□□□□ -0.12
CPNE1-211ENST00000420363 TM2D2Q9BX73 214 aa14.3□□□□□ -0.12
CPNE1-211ENST00000420363 HIGD1CA8MV81 97 aa14.29□□□□□ -0.12
CPNE1-211ENST00000420363 PSCAO43653 123 aa14.29□□□□□ -0.12
CPNE1-211ENST00000420363 ELOBQ15370 118 aa14.29□□□□□ -0.12
CPNE1-211ENST00000420363 PGLYRP4Q96LB8 373 aa14.29□□□□□ -0.12
CPNE1-211ENST00000420363 NIT2Q9NQR4 276 aa14.29□□□□□ -0.12
CPNE1-211ENST00000420363 V9GYV3 84 aa14.29□□□□□ -0.12
CPNE1-211ENST00000420363 TRBV25-1A0A075B6N4 114 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 A0A1B0GUT8 65 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 ADIRFQ15847 76 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 IQCJQ1A5X6 159 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 NTM-AS1Q6ZSK4 140 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 PGPEP1Q9NXJ5 209 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 COX11Q9Y6N1 276 aa14.27□□□□□ -0.13
CPNE1-211ENST00000420363 RAB14P61106 215 aa14.26□□□□□ -0.13
CPNE1-211ENST00000420363 LRCOL1A6NCL2 159 aa14.25□□□□□ -0.13
CPNE1-211ENST00000420363 GATD1Q8NB37 220 aa14.25□□□□□ -0.13
CPNE1-211ENST00000420363 RMI2Q96E14 147 aa14.25□□□□□ -0.13
CPNE1-211ENST00000420363 CHCHD5Q9BSY4 110 aa14.25□□□□□ -0.13
CPNE1-211ENST00000420363 APOBP04114 4563 aaKnown RBP14.25□□□□□ -0.13
CPNE1-211ENST00000420363 IGHV1-24A0A0C4DH33 117 aa14.24□□□□□ -0.13
CPNE1-211ENST00000420363 KLK12Q9UKR0 248 aa14.24□□□□□ -0.13
CPNE1-211ENST00000420363 TMEM262E9PQX1 116 aa14.23□□□□□ -0.13
CPNE1-211ENST00000420363 Q0VG73 95 aa14.23□□□□□ -0.13
CPNE1-211ENST00000420363 MPV17L2Q567V2 206 aa14.23□□□□□ -0.13
CPNE1-211ENST00000420363 ATRAIDQ6UW56 229 aa14.23□□□□□ -0.13
CPNE1-211ENST00000420363 TMEM191AQ9H0A3 160 aa14.23□□□□□ -0.13
CPNE1-211ENST00000420363 NAT8BQ9UHF3 227 aa14.23□□□□□ -0.13
CPNE1-211ENST00000420363 TRAV26-2A0A0B4J265 109 aa14.22□□□□□ -0.13
CPNE1-211ENST00000420363 NUP35Q8NFH5 326 aa14.22□□□□□ -0.13
CPNE1-211ENST00000420363 NTN5Q8WTR8 489 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-211ENST00000420363 UBE2WQ96B02 151 aa14.21□□□□□ -0.13
CPNE1-211ENST00000420363 RIGQ13278 110 aa14.2□□□□□ -0.14
CPNE1-211ENST00000420363 CLLU1Q5K131 121 aa14.2□□□□□ -0.14
CPNE1-211ENST00000420363 SMIM27A0A1W2PRY6 76 aa14.19□□□□□ -0.14
CPNE1-211ENST00000420363 CRPP02741 224 aa14.19□□□□□ -0.14
CPNE1-211ENST00000420363 COTL1Q14019 142 aa14.19□□□□□ -0.14
CPNE1-211ENST00000420363 TMEM243Q9BU79 118 aa14.19□□□□□ -0.14
CPNE1-211ENST00000420363 ANGP03950 147 aaKnown RBP14.18□□□□□ -0.14
CPNE1-211ENST00000420363 RBX1P62877 108 aa14.18□□□□□ -0.14
CPNE1-211ENST00000420363 Q8N814 137 aa14.18□□□□□ -0.14
CPNE1-211ENST00000420363 RPL39LQ96EH5 51 aaKnown RBP14.18□□□□□ -0.14
CPNE1-211ENST00000420363 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
CPNE1-211ENST00000420363 NCR2O95944 276 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms