RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR5AL1P0C617 328 aa9.57□□□□□ -0.88
RPS28-201ENST00000417088 MIAQ16674 131 aa9.57□□□□□ -0.88
RPS28-201ENST00000417088 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
RPS28-201ENST00000417088 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
RPS28-201ENST00000417088 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
RPS28-201ENST00000417088 MBD3L1Q8WWY6 194 aa9.57□□□□□ -0.88
RPS28-201ENST00000417088 F5H697 171 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 HLA-DQA1P01909 254 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 RPL37AP61513 92 aaKnown RBP9.56□□□□□ -0.88
RPS28-201ENST00000417088 PKIAP61925 76 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 KRTAP26-1Q6PEX3 210 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 SFT2D1Q8WV19 159 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 VAX2Q9UIW0 290 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 UBR4Q5T4S7 5183 aa9.56□□□□□ -0.88
RPS28-201ENST00000417088 A0A1B0GV50 99 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 SSTP61278 116 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 RBX1P62877 108 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 TMEM97Q5BJF2 176 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 FAM213BQ8TBF2 198 aa9.55□□□□□ -0.88
RPS28-201ENST00000417088 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
RPS28-201ENST00000417088 GAGE6Q13070 117 aa9.54□□□□□ -0.88
RPS28-201ENST00000417088 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
RPS28-201ENST00000417088 DERL1Q9BUN8 251 aa9.54□□□□□ -0.88
RPS28-201ENST00000417088 SMLR1H3BR10 107 aa9.53□□□□□ -0.88
RPS28-201ENST00000417088 PFDN1O60925 122 aa9.53□□□□□ -0.88
RPS28-201ENST00000417088 TMUB2Q71RG4 321 aa9.53□□□□□ -0.88
RPS28-201ENST00000417088 LINC00269Q8N2A0 174 aa9.53□□□□□ -0.88
RPS28-201ENST00000417088 KCNRGQ8N5I3 272 aa9.53□□□□□ -0.88
RPS28-201ENST00000417088 DAZAP1Q96EP5 407 aaKnown RBP9.53□□□□□ -0.88
RPS28-201ENST00000417088 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.53□□□□□ -0.88
RPS28-201ENST00000417088 TRBV25-1A0A075B6N4 114 aa9.52□□□□□ -0.89
RPS28-201ENST00000417088 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
RPS28-201ENST00000417088 PANO1I0J062 215 aa9.52□□□□□ -0.89
RPS28-201ENST00000417088 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
RPS28-201ENST00000417088 AP1S3Q96PC3 154 aa9.52□□□□□ -0.89
RPS28-201ENST00000417088 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
RPS28-201ENST00000417088 ZNF345Q14585 488 aa9.51□□□□□ -0.89
RPS28-201ENST00000417088 IQCJQ1A5X6 159 aa9.51□□□□□ -0.89
RPS28-201ENST00000417088 IGHV1-24A0A0C4DH33 117 aa9.5□□□□□ -0.89
RPS28-201ENST00000417088 RPL35P42766 123 aaKnown RBP9.5□□□□□ -0.89
RPS28-201ENST00000417088 PLA2G2DQ9UNK4 145 aa9.5□□□□□ -0.89
RPS28-201ENST00000417088 M0QY20 66 aa9.49□□□□□ -0.89
RPS28-201ENST00000417088 H2AFB1P0C5Y9 115 aa9.49□□□□□ -0.89
RPS28-201ENST00000417088 GZMBP10144 247 aa9.49□□□□□ -0.89
RPS28-201ENST00000417088 REG3AQ06141 175 aa9.49□□□□□ -0.89
RPS28-201ENST00000417088 CLRN3Q8NCR9 226 aa9.49□□□□□ -0.89
RPS28-201ENST00000417088 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 MGPP08493 103 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 IGLC6P0CF74 106 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 RGS21Q2M5E4 152 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 FER1L6-AS1Q8NA97 138 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 C11orf52Q96A22 123 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 TPPP3Q9BW30 176 aa9.48□□□□□ -0.89
RPS28-201ENST00000417088 CNBPP62633 177 aaKnown RBP9.47□□□□□ -0.89
RPS28-201ENST00000417088 CCL20P78556 96 aa9.47□□□□□ -0.89
RPS28-201ENST00000417088 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
RPS28-201ENST00000417088 IGLV4-60A0A075B6I1 120 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 A0A0D9SG52 128 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 HMSDA8MTL9 139 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 H7C1H1 209 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 BCL2L11O43521 198 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 NKX2-5P52952 324 aaPredicted RBP9.46□□□□□ -0.9
RPS28-201ENST00000417088 RPS20P60866 119 aaKnown RBP9.46□□□□□ -0.9
RPS28-201ENST00000417088 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 OR2D3Q8NGH3 330 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 GFRA4Q9GZZ7 299 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 GNG13Q9P2W3 67 aa9.46□□□□□ -0.9
RPS28-201ENST00000417088 TRAV8-4A0A0B4J246 113 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 A0A1B0GUV1 79 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 KANTRA0A1W2PQU2 76 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 hDV102S1A0JD36 115 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 P01737 135 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 CACNG7P62955 275 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
RPS28-201ENST00000417088 SLPIP03973 132 aa9.44□□□□□ -0.9
RPS28-201ENST00000417088 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
RPS28-201ENST00000417088 EIF5AP63241 154 aaKnown RBP9.44□□□□□ -0.9
RPS28-201ENST00000417088 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
RPS28-201ENST00000417088 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
RPS28-201ENST00000417088 RAB5CP51148 216 aa9.43□□□□□ -0.9
RPS28-201ENST00000417088 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
RPS28-201ENST00000417088 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
RPS28-201ENST00000417088 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
RPS28-201ENST00000417088 F2Z2F3 143 aa9.42□□□□□ -0.9
RPS28-201ENST00000417088 Q6ZRU5 148 aa9.42□□□□□ -0.9
RPS28-201ENST00000417088 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
RPS28-201ENST00000417088 A0A087WYN8 130 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.41□□□□□ -0.9
RPS28-201ENST00000417088 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 NTF3P20783 257 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms