RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SMIM20Q8N5G0 67 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 C3orf84H3BNL1 204 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 A0A0G2JMZ2 1700 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 LRRC37A2A6NM11 1700 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 UBE2D2P62837 147 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 COL24A1Q17RW2 1714 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 BPY2O14599 106 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 TMEM190Q8WZ59 177 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 MYCNOSP40205 109 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 C20orf144Q9BQM9 153 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 COL5A3P25940 1745 aaPredicted RBP14.19□□□□□ -0.14
SHANK3-202ENST00000414786 KIR2DL5BQ8NHK3 375 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 FREM1Q5H8C1 2179 aa14.19□□□□□ -0.14
SHANK3-202ENST00000414786 RPL37AP8A6NKH3 93 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 REG3AQ06141 175 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 KIAA1671Q9BY89 1806 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 C1orf158Q8N1D5 194 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 UPK3BQ9BT76 320 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 C14orf177Q52M58 125 aa14.18□□□□□ -0.14
SHANK3-202ENST00000414786 LINC00311Q8N616 119 aa14.17□□□□□ -0.14
SHANK3-202ENST00000414786 UNQ9165/PRO28630Q6UXU0 137 aa14.17□□□□□ -0.14
SHANK3-202ENST00000414786 FAM236DA0A1B0GTK5 79 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 FAM236CP0DP71 79 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 Q6ZUT4 128 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 LINC01620Q4KN68 170 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 C16orf54Q6UWD8 224 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 NFE4Q86UQ8 179 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 H0YGX0 51 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 Q6ZTI0 123 aa14.16□□□□□ -0.14
SHANK3-202ENST00000414786 NCOA6Q14686 2063 aaPredicted RBP14.16□□□□□ -0.14
SHANK3-202ENST00000414786 IGLV1-44P01699 117 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 PRO0255Q9UI72 69 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 MALRD1Q5VYJ5 2156 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 ADAMTS9Q9P2N4 1935 aa14.15□□□□□ -0.14
SHANK3-202ENST00000414786 IGLV2-8P01709 118 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 PLA2G2CQ5R387 149 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 ZNF524Q96C55 264 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 WFDC13Q8IUB5 93 aa14.14□□□□□ -0.15
SHANK3-202ENST00000414786 MAP6D1Q9H9H5 199 aa14.13□□□□□ -0.15
SHANK3-202ENST00000414786 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
SHANK3-202ENST00000414786 POM121L12Q8N7R1 296 aa14.12□□□□□ -0.15
SHANK3-202ENST00000414786 ZNF747Q9BV97 191 aa14.12□□□□□ -0.15
SHANK3-202ENST00000414786 THSD7AQ9UPZ6 1657 aa14.12□□□□□ -0.15
SHANK3-202ENST00000414786 MUC4Q99102 2169 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 SDIM1Q6ZPB5 146 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 TMEM256-PLSCR3K7ERE1 68 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 Q6ZS49 121 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 FOXL2NBQ6ZUU3 175 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 CHCHD10Q8WYQ3 142 aaPredicted RBP14.11□□□□□ -0.15
SHANK3-202ENST00000414786 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
SHANK3-202ENST00000414786 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 IGLV2-11P01706 119 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 PLA2G1BP04054 148 aaKnown RBP14.1□□□□□ -0.15
SHANK3-202ENST00000414786 SERP1Q9Y6X1 66 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 K7EIM0 57 aa14.1□□□□□ -0.15
SHANK3-202ENST00000414786 KIAA1549Q9HCM3 1950 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 WFDC2Q14508 124 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 PTH2Q96A98 100 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 I3L2K1 104 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 CREBBPQ92793 2442 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 SORL1Q92673 2214 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 CIRBP-AS1Q8TBR5 109 aa14.09□□□□□ -0.15
SHANK3-202ENST00000414786 SLX1AQ9BQ83 275 aa14.08□□□□□ -0.15
SHANK3-202ENST00000414786 LOXL1Q08397 574 aaPredicted RBP14.08□□□□□ -0.16
SHANK3-202ENST00000414786 Q6ZVQ6 151 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 OBSL1O75147 1896 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 TRBV6-1A0A0K0K1D8 114 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 ATOX1O00244 68 aa14.08□□□□□ -0.16
SHANK3-202ENST00000414786 FNDC1Q4ZHG4 1894 aaPredicted RBP14.07□□□□□ -0.16
SHANK3-202ENST00000414786 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
SHANK3-202ENST00000414786 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
SHANK3-202ENST00000414786 MED14OSP0DP75 135 aa14.07□□□□□ -0.16
SHANK3-202ENST00000414786 LY6G6DO95868 133 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 LINC01548A6NM66 108 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 TEN1Q86WV5 123 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 ZFAND3Q9H8U3 227 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 PRR14LQ5THK1 2151 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 TRBV10-1A0A0K0K1A3 114 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 IGLV11-55A0A075B6I3 123 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 C19orf84I3L1E1 186 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 C22orf34Q6ZV56 151 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 NDUFA11Q86Y39 141 aa14.06□□□□□ -0.16
SHANK3-202ENST00000414786 LY6LH3BQJ8 138 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 FXYD2P54710 66 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 PIP4P1Q86T03 277 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 SPINK1P00995 79 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 ENHOQ6UWT2 76 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 PRR15LQ9BU68 103 aa14.05□□□□□ -0.16
SHANK3-202ENST00000414786 ZFAND2AQ8N6M9 145 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 C11orf86A6NJI1 115 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 WFDC10AQ9H1F0 79 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 KAAG1Q9UBP8 84 aa14.04□□□□□ -0.16
SHANK3-202ENST00000414786 JMJD7-PLA2G4BH0Y9G9 81 aa14.03□□□□□ -0.16
SHANK3-202ENST00000414786 CXCL5P42830 114 aa14.03□□□□□ -0.16
SHANK3-202ENST00000414786 C11orf53Q8IXP5 236 aa14.03□□□□□ -0.16
SHANK3-202ENST00000414786 NANOS2P60321 138 aaKnown RBP14.03□□□□□ -0.16
SHANK3-202ENST00000414786 PIK3CD-AS1Q5SR53 167 aa14.02□□□□□ -0.16
SHANK3-202ENST00000414786 FAM30AQ9NZY2 134 aa14.02□□□□□ -0.16
SHANK3-202ENST00000414786 SNURFQ9Y675 71 aa14.02□□□□□ -0.16
SHANK3-202ENST00000414786 KIR2DL5BA0A0G2JN68 375 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms