RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 C7orf71A4D174 169 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 M0R2Z0 102 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 SH2D1AO60880 128 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 SNAPINO95295 136 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 MGST1P10620 155 aaKnown RBP2.82□□□□□ -1.96
CLK1-203ENST00000409769 TSPOP30536 169 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 LEPP41159 167 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 BTN1A1Q13410 526 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 SPINK13Q1W4C9 94 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 SMUG1Q53HV7 270 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 DNLZQ5SXM8 178 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 IBA57Q5T440 356 aaKnown RBP2.82□□□□□ -1.96
CLK1-203ENST00000409769 MORN3Q6PF18 240 aaPredicted RBP2.82□□□□□ -1.96
CLK1-203ENST00000409769 Q6ZQT7 251 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 DEFB125Q8N687 156 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 OR4B1Q8NGF8 309 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 SFRP2Q96HF1 295 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 YPEL4Q96NS1 127 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 NDFIP1Q9BT67 221 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 RNASE7Q9H1E1 156 aaKnown RBP2.82□□□□□ -1.96
CLK1-203ENST00000409769 TMEM242Q9NWH2 141 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 ZMAT5Q9UDW3 170 aaKnown RBP2.82□□□□□ -1.96
CLK1-203ENST00000409769 PKD1L1Q8TDX9 2849 aa2.82□□□□□ -1.96
CLK1-203ENST00000409769 DNAH9Q9NYC9 4486 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
CLK1-203ENST00000409769 TRAV12-2A0A075B6T6 113 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 TRAV21A0A0B4J279 112 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 KIR2DL5BA0A0G2JN68 375 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 KIR2DL5BA0A0G2JPC4 375 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 SMIM27A0A1W2PRY6 76 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 FAM231BA6NCW3 169 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 FABP5P3A8MUU1 101 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 M0R036 132 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 PPP1R2P9O14990 202 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 P01737 135 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 MT-ND4LP03901 98 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 GPX1P07203 203 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 CXCL1P09341 107 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 RNASE4P34096 147 aaKnown RBP2.81□□□□□ -1.96
CLK1-203ENST00000409769 FOXA3P55318 350 aaPredicted RBP2.81□□□□□ -1.96
CLK1-203ENST00000409769 FXYD7P58549 80 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 RPL19P84098 196 aaKnown RBP2.81□□□□□ -1.96
CLK1-203ENST00000409769 TDRG1Q3Y452 100 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 FAM162BQ5T6X4 162 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 KIR2DL5AQ8N109 375 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 C1orf158Q8N1D5 194 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 KIR2DL5BQ8NHK3 375 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 IMMP2LQ96T52 175 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 C20orf144Q9BQM9 153 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 LINC00467Q9BRT7 94 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 RPP21Q9H633 154 aaKnown RBP2.81□□□□□ -1.96
CLK1-203ENST00000409769 TUBA4BQ9H853 241 aa2.81□□□□□ -1.96
CLK1-203ENST00000409769 LOC102724200A0A096LPH7 203 aaPredicted RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 TRAV12-3A0A0B4J271 114 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 TMEM189A5PLL7 270 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 ZNF705GA8MUZ8 300 aaPredicted RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 E9PLD3 99 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 H7BYZ3 331 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 K7EIL1 84 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 SNAI2O43623 268 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 GATCO43716 136 aaKnown RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 SCO1O75880 301 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 CA1P00915 261 aaPredicted RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 INSP01308 110 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 TYMSP04818 313 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 IGLC6P0CF74 106 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 RPS20P60866 119 aaKnown RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 NUTF2P61970 127 aaKnown RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 ZNF705AQ6ZN79 300 aaPredicted RBP2.8□□□□□ -1.96
CLK1-203ENST00000409769 C15orf54Q8N8G6 183 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 TSKUQ8WUA8 353 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 SPXQ9BT56 116 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 CNFNQ9BYD5 112 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 IL36BQ9NZH7 164 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 XCL2Q9UBD3 114 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 NBEAL1Q6ZS30 2694 aa2.8□□□□□ -1.96
CLK1-203ENST00000409769 TRBV24-1A0A075B6N3 115 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 TRAV9-1A0A075B6T8 112 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 IGHV1OR15-1A0A075B7D0 117 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 PLAC8L1A1L4L8 177 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 HIGD1CA8MV81 97 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 A8MWL6 223 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 PANO1I0J062 215 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 GNRH2O43555 120 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 ORM1P02763 201 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 OR5AL1P0C617 328 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 GZMBP10144 247 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 RNASE3P12724 160 aaKnown RBP2.79□□□□□ -1.96
CLK1-203ENST00000409769 CTRLP40313 264 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 APOC4P55056 127 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 ELOBQ15370 118 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 CBLN2Q8IUK8 224 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 TMEM256Q8N2U0 113 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 GATD1Q8NB37 220 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 C11orf72Q8NBR9 251 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 NUP35Q8NFH5 326 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 OR2D3Q8NGH3 330 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 KCNS1Q96KK3 526 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 SMCO4Q9NRQ5 59 aa2.79□□□□□ -1.96
CLK1-203ENST00000409769 NAT8BQ9UHF3 227 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms