RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 C11orf52Q96A22 123 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 DNAJC30Q96LL9 226 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 RAB5CP51148 216 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 EIF5AL1Q6IS14 154 aaKnown RBP9.68□□□□□ -0.86
CBX3-203ENST00000409747 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 C15orf54Q8N8G6 183 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 GNG13Q9P2W3 67 aa9.68□□□□□ -0.86
CBX3-203ENST00000409747 TRAV1-1A0A0B4J248 108 aa9.67□□□□□ -0.86
CBX3-203ENST00000409747 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
CBX3-203ENST00000409747 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
CBX3-203ENST00000409747 ANGP03950 147 aaKnown RBP9.67□□□□□ -0.86
CBX3-203ENST00000409747 RPS20P60866 119 aaKnown RBP9.67□□□□□ -0.86
CBX3-203ENST00000409747 MPV17L2Q567V2 206 aa9.67□□□□□ -0.86
CBX3-203ENST00000409747 DAZAP1Q96EP5 407 aaKnown RBP9.66□□□□□ -0.86
CBX3-203ENST00000409747 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
CBX3-203ENST00000409747 VAX2Q9UIW0 290 aa9.66□□□□□ -0.86
CBX3-203ENST00000409747 MIAQ16674 131 aa9.65□□□□□ -0.86
CBX3-203ENST00000409747 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
CBX3-203ENST00000409747 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
CBX3-203ENST00000409747 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
CBX3-203ENST00000409747 DERL1Q9BUN8 251 aa9.65□□□□□ -0.86
CBX3-203ENST00000409747 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.86
CBX3-203ENST00000409747 H7C1H1 209 aa9.65□□□□□ -0.87
CBX3-203ENST00000409747 SSTP61278 116 aa9.65□□□□□ -0.87
CBX3-203ENST00000409747 LINC01620Q4KN68 170 aa9.65□□□□□ -0.87
CBX3-203ENST00000409747 KIF25-AS1Q9Y6Z4 181 aa9.65□□□□□ -0.87
CBX3-203ENST00000409747 TRBV25-1A0A075B6N4 114 aa9.64□□□□□ -0.87
CBX3-203ENST00000409747 XKRY2A2RUG3 117 aa9.64□□□□□ -0.87
CBX3-203ENST00000409747 CACNG7P62955 275 aa9.64□□□□□ -0.87
CBX3-203ENST00000409747 FER1L6-AS1Q8NA97 138 aa9.64□□□□□ -0.87
CBX3-203ENST00000409747 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
CBX3-203ENST00000409747 TPPP3Q9BW30 176 aa9.64□□□□□ -0.87
CBX3-203ENST00000409747 J3QL48 77 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 PDE6DO43924 150 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 IFNA1P01562 189 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 GNG4P50150 75 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 CCL20P78556 96 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 OR2D3Q8NGH3 330 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 BIN3Q9NQY0 253 aa9.63□□□□□ -0.87
CBX3-203ENST00000409747 HLA-DQA1P01909 254 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 MGPP08493 103 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 MEF2BQ02080 365 aaPredicted RBP9.62□□□□□ -0.87
CBX3-203ENST00000409747 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 F2Z2F3 143 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 P01737 135 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 PRR34Q9NV39 138 aa9.62□□□□□ -0.87
CBX3-203ENST00000409747 C19orf71A6NCJ1 209 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 M0QY20 66 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 GZMBP10144 247 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 SULT1A2P50226 295 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 RBX1P62877 108 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 IQCJQ1A5X6 159 aa9.61□□□□□ -0.87
CBX3-203ENST00000409747 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
CBX3-203ENST00000409747 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
CBX3-203ENST00000409747 RAB19A4D1S5 217 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 GAGE6Q13070 117 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 SUMO4Q6EEV6 95 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 MED9Q9NWA0 146 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 BCL2P10415 239 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 TAGLN2P37802 199 aaKnown RBP9.59□□□□□ -0.87
CBX3-203ENST00000409747 DGAT2L7PQ6IED9 249 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 RASL11AQ6T310 242 aa9.59□□□□□ -0.87
CBX3-203ENST00000409747 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
CBX3-203ENST00000409747 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
CBX3-203ENST00000409747 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
CBX3-203ENST00000409747 TCTE3Q8IZS6 198 aa9.57□□□□□ -0.88
CBX3-203ENST00000409747 NKX2-5P52952 324 aaPredicted RBP9.56□□□□□ -0.88
CBX3-203ENST00000409747 REG3AQ06141 175 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 LYZL1Q6UWQ5 148 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 SLC51BQ86UW2 128 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 TMEM243Q9BU79 118 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 TRBV20OR9-2A0A075B6H5 130 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 TRAV8-4A0A0B4J246 113 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 PRSS1P07477 247 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 CTRLP40313 264 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 WDR73Q6P4I2 378 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 CLRN3Q8NCR9 226 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
CBX3-203ENST00000409747 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
CBX3-203ENST00000409747 NTF3P20783 257 aa9.55□□□□□ -0.88
CBX3-203ENST00000409747 C9orf62Q8N4C0 152 aa9.55□□□□□ -0.88
CBX3-203ENST00000409747 UBE2L6O14933 153 aa9.54□□□□□ -0.88
CBX3-203ENST00000409747 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
CBX3-203ENST00000409747 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
CBX3-203ENST00000409747 COTL1Q14019 142 aa9.53□□□□□ -0.88
CBX3-203ENST00000409747 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
CBX3-203ENST00000409747 NUDT11Q96G61 164 aa9.53□□□□□ -0.88
CBX3-203ENST00000409747 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
CBX3-203ENST00000409747 RPP21Q9H633 154 aaKnown RBP9.53□□□□□ -0.88
CBX3-203ENST00000409747 IGLV10-54A0A075B6I4 117 aa9.53□□□□□ -0.88
CBX3-203ENST00000409747 TWIST1Q15672 202 aa9.53□□□□□ -0.88
CBX3-203ENST00000409747 C20orf203Q8NBC4 194 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms