RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TIMM17AQ99595 171 aa12.21□□□□□ -0.46
COL23A1-202ENST00000407622 TEX48A0A1B0GUV7 120 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 PRM2P04554 102 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 SYT8Q8NBV8 401 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 KNCNA6PVL3 124 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 HOXA3O43365 443 aaPredicted RBP12.2□□□□□ -0.46
COL23A1-202ENST00000407622 P0DMU3 169 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 SLURP1P55000 103 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 RPL24P83731 157 aaKnown RBP12.2□□□□□ -0.46
COL23A1-202ENST00000407622 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 TMEM141Q96I45 108 aa12.2□□□□□ -0.46
COL23A1-202ENST00000407622 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 HTN1P15515 57 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 WFDC2Q14508 124 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 Q6YL49 198 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 J3QLI3 93 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 FSHBP01225 129 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 ELANEP08246 267 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 TCTEX1D4Q5JR98 221 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 TMEM170BQ5T4T1 132 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 Q96MF0 132 aa12.19□□□□□ -0.46
COL23A1-202ENST00000407622 UBE2E2Q96LR5 201 aa12.18□□□□□ -0.46
COL23A1-202ENST00000407622 NBPF19A0A087WUL8 3843 aa12.18□□□□□ -0.46
COL23A1-202ENST00000407622 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
COL23A1-202ENST00000407622 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
COL23A1-202ENST00000407622 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
COL23A1-202ENST00000407622 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
COL23A1-202ENST00000407622 SRSF9Q13242 221 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL23A1-202ENST00000407622 A0A0J9YY99 117 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 PROK1P58294 105 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
COL23A1-202ENST00000407622 PGPEP1Q9NXJ5 209 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 CUBNO60494 3623 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 HERVK_113P61574 105 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 PAPPA-AS1Q5QFB9 102 aa12.16□□□□□ -0.46
COL23A1-202ENST00000407622 RBMY1BA6NDE4 496 aaKnown RBP12.15□□□□□ -0.46
COL23A1-202ENST00000407622 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
COL23A1-202ENST00000407622 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
COL23A1-202ENST00000407622 DEFB131AP59861 70 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 SFTA2Q6UW10 78 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 AMELXQ99217 191 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 UBE2D1P51668 147 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.46
COL23A1-202ENST00000407622 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
COL23A1-202ENST00000407622 RHOHQ15669 191 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 RNF152Q8N8N0 203 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
COL23A1-202ENST00000407622 Q9UF83 564 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 PRO0461Q9UI25 63 aa12.14□□□□□ -0.47
COL23A1-202ENST00000407622 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
COL23A1-202ENST00000407622 PDZD2O15018 2839 aa12.13□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM238C9JI98 176 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 F8W1H4 67 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 APOMO95445 188 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 I3L3M4 83 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 TSPAN13O95857 204 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 ETDBQ3ZM63 59 aa12.12□□□□□ -0.47
COL23A1-202ENST00000407622 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
COL23A1-202ENST00000407622 J3QQQ9 107 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM61Q8N0U2 210 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
COL23A1-202ENST00000407622 H3BMM0 161 aa12.11□□□□□ -0.47
COL23A1-202ENST00000407622 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 A6NJY4 79 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 GAGE13Q4V321 117 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 FAM104AQ969W3 186 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 NF1P21359 2839 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
COL23A1-202ENST00000407622 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
COL23A1-202ENST00000407622 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
COL23A1-202ENST00000407622 Q6ZSN1 163 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 SLC25A29Q8N8R3 303 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 SPAG8Q99932 426 aaPredicted RBP12.09□□□□□ -0.47
COL23A1-202ENST00000407622 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
COL23A1-202ENST00000407622 LGALS3P17931 250 aaKnown RBP12.08□□□□□ -0.48
COL23A1-202ENST00000407622 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 WNK1Q9H4A3 2382 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 A8MTW9 85 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 CFC1BP0CG36 223 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 CFC1P0CG37 223 aa12.08□□□□□ -0.48
COL23A1-202ENST00000407622 INSL3P51460 131 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms