RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 KRTAP10-9P60411 292 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 HERV-K104P63124 156 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
MATN3-201ENST00000407540 TRBV7-3A0A075B6L6 115 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 K7EQG2 157 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 MORN3Q6PF18 240 aaPredicted RBP12.73□□□□□ -0.37
MATN3-201ENST00000407540 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
MATN3-201ENST00000407540 Q6ZUT4 128 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 A0A1B0GWB2 263 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 IGIPA6NJ69 53 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 APOMO95445 188 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
MATN3-201ENST00000407540 FOXI1Q12951 378 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 ZNF56Q15929 161 aa12.72□□□□□ -0.37
MATN3-201ENST00000407540 SNRPD3P62318 126 aaKnown RBP12.71□□□□□ -0.37
MATN3-201ENST00000407540 ZNF815PA8K554 130 aa12.71□□□□□ -0.37
MATN3-201ENST00000407540 B5MCH6 92 aa12.71□□□□□ -0.37
MATN3-201ENST00000407540 RBMY1A1P0DJD3 496 aaKnown RBP12.71□□□□□ -0.37
MATN3-201ENST00000407540 RBMY1CP0DJD4 496 aa12.71□□□□□ -0.37
MATN3-201ENST00000407540 RBMY1FQ15415 496 aaKnown RBP12.71□□□□□ -0.37
MATN3-201ENST00000407540 EPG5Q9HCE0 2579 aa12.71□□□□□ -0.38
MATN3-201ENST00000407540 NF1P21359 2839 aa12.71□□□□□ -0.38
MATN3-201ENST00000407540 IGHV3-73A0A0B4J1V6 119 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 HOXA3O43365 443 aaPredicted RBP12.7□□□□□ -0.38
MATN3-201ENST00000407540 GAGE5Q13069 117 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 GAGE6Q13070 117 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 C9orf85Q96MD7 179 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 SLURP1P55000 103 aa12.7□□□□□ -0.38
MATN3-201ENST00000407540 SFTA2Q6UW10 78 aa12.69□□□□□ -0.38
MATN3-201ENST00000407540 ANAPC13Q9BS18 74 aa12.69□□□□□ -0.38
MATN3-201ENST00000407540 ZNF702PQ9H963 129 aa12.69□□□□□ -0.38
MATN3-201ENST00000407540 VCYO14598 125 aa12.69□□□□□ -0.38
MATN3-201ENST00000407540 NFE4Q86UQ8 179 aa12.69□□□□□ -0.38
MATN3-201ENST00000407540 KIR2DL4Q99706 377 aa12.69□□□□□ -0.38
MATN3-201ENST00000407540 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 M0QY20 66 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 PPP1R17O96001 155 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 PROK1P58294 105 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 SCGB1D4Q6XE38 83 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
MATN3-201ENST00000407540 FAM110AQ9BQ89 295 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 VPREB3Q9UKI3 123 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 C1QTNF4Q9BXJ3 329 aa12.68□□□□□ -0.38
MATN3-201ENST00000407540 P0DMU3 169 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 COX6B1P14854 86 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 SMCPP49901 116 aaPredicted RBP12.67□□□□□ -0.38
MATN3-201ENST00000407540 LGALS9O00182 355 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 Q9UF83 564 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
MATN3-201ENST00000407540 CHD6Q8TD26 2715 aa12.67□□□□□ -0.38
MATN3-201ENST00000407540 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.38
MATN3-201ENST00000407540 DSCR9P59020 149 aa12.66□□□□□ -0.38
MATN3-201ENST00000407540 PMVKQ15126 192 aa12.66□□□□□ -0.38
MATN3-201ENST00000407540 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
MATN3-201ENST00000407540 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
MATN3-201ENST00000407540 TAL2Q16559 108 aa12.65□□□□□ -0.38
MATN3-201ENST00000407540 RRN3P1Q2M238 152 aa12.65□□□□□ -0.38
MATN3-201ENST00000407540 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
MATN3-201ENST00000407540 DEFB131AP59861 70 aa12.64□□□□□ -0.39
MATN3-201ENST00000407540 Q6YL49 198 aa12.64□□□□□ -0.39
MATN3-201ENST00000407540 SMIM20Q8N5G0 67 aa12.64□□□□□ -0.39
MATN3-201ENST00000407540 UBR5O95071 2799 aaPredicted RBP12.64□□□□□ -0.39
MATN3-201ENST00000407540 NHLRC4P0CG21 123 aaPredicted RBP12.64□□□□□ -0.39
MATN3-201ENST00000407540 IGHV4-31P0DP07 118 aa12.64□□□□□ -0.39
MATN3-201ENST00000407540 SRSF9Q13242 221 aaKnown RBP eCLIP12.64□□□□□ -0.39
MATN3-201ENST00000407540 WNK1Q9H4A3 2382 aa12.64□□□□□ -0.39
MATN3-201ENST00000407540 CCDC168Q8NDH2 2452 aa12.63□□□□□ -0.39
MATN3-201ENST00000407540 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
MATN3-201ENST00000407540 PRRC2AP48634 2157 aaKnown RBP12.63□□□□□ -0.39
MATN3-201ENST00000407540 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
MATN3-201ENST00000407540 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
MATN3-201ENST00000407540 RBMY1DP0C7P1 496 aaKnown RBP12.62□□□□□ -0.39
MATN3-201ENST00000407540 KHDC1LQ5JSQ8 128 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 ATP6V0E2Q8NHE4 81 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 APCP25054 2843 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 CR1P17927 2039 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 UBE2E2Q96LR5 201 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
MATN3-201ENST00000407540 TRBV6-5A0A0K0K1A5 114 aa12.61□□□□□ -0.39
MATN3-201ENST00000407540 ELANEP08246 267 aa12.61□□□□□ -0.39
MATN3-201ENST00000407540 PTH2Q96A98 100 aa12.61□□□□□ -0.39
MATN3-201ENST00000407540 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
MATN3-201ENST00000407540 CEMP1Q6PRD7 247 aaPredicted RBP12.61□□□□□ -0.39
MATN3-201ENST00000407540 CARD19Q96LW7 228 aa12.61□□□□□ -0.39
MATN3-201ENST00000407540 TIMM17AQ99595 171 aa12.61□□□□□ -0.39
MATN3-201ENST00000407540 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
MATN3-201ENST00000407540 A0A0J9YY99 117 aa12.6□□□□□ -0.39
MATN3-201ENST00000407540 J3QLI3 93 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms