RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FAM30AQ9NZY2 134 aa12.74□□□□□ -0.37
SMARCB1-204ENST00000407422 RBFOX3A6NFN3 312 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 F5H697 171 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 UBE2WQ96B02 151 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 IGKV2D-24A0A075B6R9 120 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 TRBV6-8A0A0A6YYG3 113 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 TEX46H3BTG2 121 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 MEF2BQ02080 365 aaPredicted RBP12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 FRZBQ92765 325 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
SMARCB1-204ENST00000407422 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.72□□□□□ -0.37
SMARCB1-204ENST00000407422 C1QBP02746 253 aa12.72□□□□□ -0.37
SMARCB1-204ENST00000407422 MYCBP2O75592 4640 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 TRBV20OR9-2A0A075B6H5 130 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 TMEM262E9PQX1 116 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 GNG4P50150 75 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 OR2D3Q8NGH3 330 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 DAZAP1Q96EP5 407 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 CHCHD7Q9BUK0 85 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 COX11Q9Y6N1 276 aa12.71□□□□□ -0.37
SMARCB1-204ENST00000407422 HERC1Q15751 4861 aa12.71□□□□□ -0.38
SMARCB1-204ENST00000407422 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 SMIM17P0DL12 118 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 KCNIP4Q6PIL6 250 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 RMI2Q96E14 147 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 AP1S3Q96PC3 154 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 PDE6DO43924 150 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 BCL2P10415 239 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 FER1L6-AS1Q8NA97 138 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 MED9Q9NWA0 146 aa12.7□□□□□ -0.38
SMARCB1-204ENST00000407422 INAFM2P0DMQ5 153 aa12.69□□□□□ -0.38
SMARCB1-204ENST00000407422 ELOBQ15370 118 aa12.69□□□□□ -0.38
SMARCB1-204ENST00000407422 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
SMARCB1-204ENST00000407422 NTM-AS1Q6ZSK4 140 aa12.69□□□□□ -0.38
SMARCB1-204ENST00000407422 FLG2Q5D862 2391 aaPredicted RBP12.68□□□□□ -0.38
SMARCB1-204ENST00000407422 IFNA1P01562 189 aa12.68□□□□□ -0.38
SMARCB1-204ENST00000407422 RPS20P60866 119 aaKnown RBP12.68□□□□□ -0.38
SMARCB1-204ENST00000407422 LINC01620Q4KN68 170 aa12.68□□□□□ -0.38
SMARCB1-204ENST00000407422 SMIM12Q96EX1 92 aa12.68□□□□□ -0.38
SMARCB1-204ENST00000407422 ATRAIDQ6UW56 229 aa12.67□□□□□ -0.38
SMARCB1-204ENST00000407422 ENHOQ6UWT2 76 aa12.67□□□□□ -0.38
SMARCB1-204ENST00000407422 C15orf54Q8N8G6 183 aa12.67□□□□□ -0.38
SMARCB1-204ENST00000407422 CHCHD5Q9BSY4 110 aa12.67□□□□□ -0.38
SMARCB1-204ENST00000407422 VAX2Q9UIW0 290 aa12.67□□□□□ -0.38
SMARCB1-204ENST00000407422 P01737 135 aa12.66□□□□□ -0.38
SMARCB1-204ENST00000407422 MGPP08493 103 aa12.66□□□□□ -0.38
SMARCB1-204ENST00000407422 Q8N976 141 aa12.66□□□□□ -0.38
SMARCB1-204ENST00000407422 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.66□□□□□ -0.38
SMARCB1-204ENST00000407422 M0QY20 66 aa12.66□□□□□ -0.38
SMARCB1-204ENST00000407422 ANGP03950 147 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-204ENST00000407422 Q0VG73 95 aa12.65□□□□□ -0.38
SMARCB1-204ENST00000407422 Q6ZSA8 131 aa12.65□□□□□ -0.38
SMARCB1-204ENST00000407422 C9orf62Q8N4C0 152 aa12.65□□□□□ -0.38
SMARCB1-204ENST00000407422 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
SMARCB1-204ENST00000407422 CACNG7P62955 275 aa12.64□□□□□ -0.39
SMARCB1-204ENST00000407422 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
SMARCB1-204ENST00000407422 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
SMARCB1-204ENST00000407422 DMBT1Q9UGM3 2413 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-204ENST00000407422 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
SMARCB1-204ENST00000407422 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
SMARCB1-204ENST00000407422 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
SMARCB1-204ENST00000407422 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 F2Z2F3 143 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 CRPP02741 224 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 NTF3P20783 257 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 GAGE6Q13070 117 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 CLLU1Q5K131 121 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
SMARCB1-204ENST00000407422 K7EN84 100 aa12.61□□□□□ -0.39
SMARCB1-204ENST00000407422 RBX1P62877 108 aa12.61□□□□□ -0.39
SMARCB1-204ENST00000407422 RNASE7Q9H1E1 156 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-204ENST00000407422 TRBV25-1A0A075B6N4 114 aa12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 H7C1H1 209 aa12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 S100A6P06703 90 aa12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 TAGLN2P37802 199 aaKnown RBP12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 ALKAL2Q6UX46 152 aa12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 OCC1Q8TAD7 63 aa12.6□□□□□ -0.39
SMARCB1-204ENST00000407422 PKIAP61925 76 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 SCO1O75880 301 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 TRGC1P0CF51 173 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 CTRLP40313 264 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 RASL11AQ6T310 242 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 LINC00269Q8N2A0 174 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 DEFB104AQ8WTQ1 72 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
SMARCB1-204ENST00000407422 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
SMARCB1-204ENST00000407422 MIAQ16674 131 aa12.58□□□□□ -0.4
SMARCB1-204ENST00000407422 TEX261Q6UWH6 196 aa12.58□□□□□ -0.4
SMARCB1-204ENST00000407422 RPP21Q9H633 154 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-204ENST00000407422 PRR34Q9NV39 138 aa12.58□□□□□ -0.4
SMARCB1-204ENST00000407422 HLA-DQA1P01909 254 aa12.57□□□□□ -0.4
SMARCB1-204ENST00000407422 COMMD7Q86VX2 200 aa12.57□□□□□ -0.4
SMARCB1-204ENST00000407422 TWIST1Q15672 202 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms