RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 EBLN2Q6P2I7 272 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF493Q6ZR52 646 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 GOLT1AQ6ZVE7 132 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 BAGE2Q86Y30 109 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 APRG1Q8IVJ8 170 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 FAM24BQ8N5W8 94 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF738Q8NE65 137 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 OR10J6PQ8NGY7 276 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 TVP23CQ96ET8 276 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGF2BP2-AS1Q96M15 143 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 LINC00052Q96N35 136 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 NDFIP1Q9BT67 221 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 DERL1Q9BUN8 251 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 AGPAT4-IT1Q9H0P7 198 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 SAV1Q9H4B6 383 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 BIN3Q9NQY0 253 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF492Q9P255 531 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 NAT8Q9UHE5 227 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 PSG8Q9UQ74 426 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 HLA-DRB4X5D2U9 266 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 MGAM2Q2M2H8 2515 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGKV2D-24A0A075B6R9 120 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGKV2-40A0A087WW87 121 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 TRAV8-1A0A0A6YYK1 113 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 B4DEV8 164 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 H3BMM0 161 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 GCGP01275 180 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGKV2D-40P01614 121 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 TSPOP30536 169 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 GNG4P50150 75 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 HIST1H1AQ02539 215 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 SLAQ13239 276 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 CENPWQ5EE01 88 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 FAM231DQ6ZW35 169 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 Q86TA4 180 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 SVBPQ8N300 66 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 FAM19A4Q96LR4 140 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 OSTCQ9NRP0 149 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 MUC4Q99102 2169 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 NOTCH1P46531 2555 aa2.98□□□□□ -1.93
HMGB3P19-201ENST00000403971 DNHD1Q96M86 4753 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 A0A087WWC5 75 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 TSPAN13O95857 204 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGLV2-8P01709 118 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 APOC3P02656 99 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 CD7P09564 240 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 CEBPGP53567 150 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 LINC00315P59091 139 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 RPL23P62829 140 aaKnown RBP2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 RHEBQ15382 184 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 SMUG1Q53HV7 270 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 ACTL10Q5JWF8 245 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 KPRPQ5T749 579 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 GDF5OSQ5U4N7 250 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 MORN3Q6PF18 240 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 AMTNQ6UX39 209 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 PRNTQ86SH4 94 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 ISOC2Q96AB3 205 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 C20orf144Q9BQM9 153 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 TMEM242Q9NWH2 141 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 NBEAL1Q6ZS30 2694 aa2.97□□□□□ -1.93
HMGB3P19-201ENST00000403971 DNAH3Q8TD57 4116 aa2.96□□□□□ -1.93
HMGB3P19-201ENST00000403971 C7orf77A4D0Y5 90 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 C19orf71A6NCJ1 209 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 KNCNA6PVL3 124 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 FABP5P3A8MUU1 101 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 K7EN84 100 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZNF324O75467 553 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 MT-ND4LP03901 98 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 GPX1P07203 203 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 PFN1P07737 140 aaKnown RBP2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 CXCL1P09341 107 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZNF705DP0CH99 300 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZNF705BP0CI00 300 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 DEFB1P60022 68 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 ERCC8Q13216 396 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 ADIRFQ15847 76 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 FAM162BQ5T6X4 162 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 Q6AWC8 147 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 OR4B1Q8NGF8 309 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 Q8TAT8 98 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZC2HC1AQ96GY0 325 aa2.96□□□□□ -1.94
HMGB3P19-201ENST00000403971 LOC102724200A0A096LPH7 203 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 TRAV21A0A0B4J279 112 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 C7orf71A4D174 169 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 A8MWL6 223 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 H7BYZ3 331 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 M0R036 132 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 CRXO43186 299 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 GATCO43716 136 aaKnown RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 SH2D1AO60880 128 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 P01737 135 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 MGST1P10620 155 aaKnown RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 CRIP1P50238 77 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZNF80P51504 273 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 FOXA3P55318 350 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 RPS20P60866 119 aaKnown RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 TDRG1Q3Y452 100 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms