RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LINC00312Q9Y6C7 94 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 PLXNA2O75051 1894 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 CUL7Q14999 1698 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 CASP8AP2Q9UKL3 1982 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 MUC22E2RYF6 1773 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 LAMB1P07942 1786 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 KDM6BO15054 1643 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 PZPP20742 1482 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 CPSF1Q10570 1443 aaKnown RBP0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 A0A087WTM6 91 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 CLPSL1A2RUU4 121 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 GTF2H5Q6ZYL4 71 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 C14orf144Q96I85 54 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 UNC13CQ8NB66 2214 aa0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 RBBP6Q7Z6E9 1792 aaKnown RBP0.93□□□□□ -2.26
HMGB1P17-201ENST00000403495 EML5Q05BV3 1969 aa0.92□□□□□ -2.26
HMGB1P17-201ENST00000403495 FAM24AA6NFZ4 105 aa0.92□□□□□ -2.26
HMGB1P17-201ENST00000403495 IFITM1P13164 125 aa0.92□□□□□ -2.26
HMGB1P17-201ENST00000403495 EDDM3BP56851 147 aa0.92□□□□□ -2.26
HMGB1P17-201ENST00000403495 RPL37P61927 97 aaKnown RBP0.92□□□□□ -2.26
HMGB1P17-201ENST00000403495 C5orf38Q86SI9 138 aa0.92□□□□□ -2.26
HMGB1P17-201ENST00000403495 PKD1L2Q7Z442 2459 aa0.91□□□□□ -2.26
HMGB1P17-201ENST00000403495 C10orf128Q5T292 105 aa0.91□□□□□ -2.26
HMGB1P17-201ENST00000403495 NRKQ7Z2Y5 1582 aa0.91□□□□□ -2.26
HMGB1P17-201ENST00000403495 SNRNP200O75643 2136 aaKnown RBP0.91□□□□□ -2.26
HMGB1P17-201ENST00000403495 A0A096LNT2 108 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 UBE2L5PA0A1B0GUS4 154 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 F2Z2F3 143 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 SSSCA1O60232 199 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 RBP2P50120 134 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 ZNF137PP52743 207 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 UBE2L3P68036 154 aaKnown RBP0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 SPINK9Q5DT21 86 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 C6orf52Q5T4I8 152 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 COMMD6Q7Z4G1 85 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 TTC9CQ8N5M4 171 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 MUC4Q99102 2169 aa0.9□□□□□ -2.27
HMGB1P17-201ENST00000403495 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 MAPKBP1O60336 1514 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 NRXN2Q9P2S2 1712 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 AKAP11Q9UKA4 1901 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 ACYP2P14621 99 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 ATP5EP56381 51 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 HSD52Q0P140 79 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 Q96NJ1 140 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 CYP4F30PQ9H0H9 118 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 CACNA1AO00555 2505 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 TET1Q8NFU7 2136 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 MYH13Q9UKX3 1938 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 LRRC37A3O60309 1634 aa0.89□□□□□ -2.27
HMGB1P17-201ENST00000403495 PXDNQ92626 1479 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 MYH6P13533 1939 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 TMEM218A2RU14 115 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 SPINK8P0C7L1 97 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 SMIM6P0DI80 62 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 MYOZ3Q8TDC0 251 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 DPH3P1Q9H4G8 78 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 SCP2D1Q9UJQ7 156 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 ARAP2Q8WZ64 1704 aa0.88□□□□□ -2.27
HMGB1P17-201ENST00000403495 TRGV1A0A0A0MS02 117 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 PPP1R17O96001 155 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 DCDP81605 110 aaKnown RBP0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 TSLPQ969D9 159 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 WFDC6Q9BQY6 131 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 BPESC1Q9GZL8 116 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 C10orf71Q711Q0 1435 aa0.87□□□□□ -2.27
HMGB1P17-201ENST00000403495 NWD2Q9ULI1 1742 aa0.86□□□□□ -2.27
HMGB1P17-201ENST00000403495 TRAV1-2A0A0B4J238 106 aa0.86□□□□□ -2.27
HMGB1P17-201ENST00000403495 SMIM11BQ8TCY0 68 aa0.86□□□□□ -2.27
HMGB1P17-201ENST00000403495 LINC00474Q9P2X8 69 aa0.86□□□□□ -2.27
HMGB1P17-201ENST00000403495 LENEPQ9Y5L5 61 aa0.86□□□□□ -2.27
HMGB1P17-201ENST00000403495 LAMA4Q16363 1823 aa0.86□□□□□ -2.27
HMGB1P17-201ENST00000403495 ZFYVE16Q7Z3T8 1539 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 ROBO1Q9Y6N7 1651 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 AFDNP55196 1824 aaKnown RBP0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 TRBV7-3A0A075B6L6 115 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 TRAV30A0A087WSZ9 112 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 GVQW2A0A096LPI5 108 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 CCL18P55774 89 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 CHD3Q12873 2000 aaKnown RBP0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 MGST2Q99735 147 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 SCAPERQ9BY12 1400 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 R4GMQ9 66 aa0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 MYO18AQ92614 2054 aaKnown RBP0.85□□□□□ -2.27
HMGB1P17-201ENST00000403495 CDK13Q14004 1512 aaKnown RBP0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 MED12Q93074 2177 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 MYH7P12883 1935 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 ATG2AQ2TAZ0 1938 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 CNTLNQ9NXG0 1405 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 A0A0D9SG42 100 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 TMEM14DPA8MWL7 114 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 TMEM262E9PQX1 116 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 SNCAP37840 140 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 GNG11P61952 73 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 SPAG11BQ08648 103 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 SPAG11AQ6PDA7 123 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 VMO1Q7Z5L0 202 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
HMGB1P17-201ENST00000403495 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms