RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 VCYO14598 125 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 P0DMU3 169 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 FAM231AP0DMU4 169 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 FAM231CP0DMU5 169 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 KRTAP10-11P60412 298 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 ZFP2Q6ZN57 461 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 X6R8D5 127 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 NUDT3O95989 172 aa18.36■□□□□ 0.53
CPNE1-205ENST00000401607 APOC4P55056 127 aa18.36■□□□□ 0.53
CPNE1-205ENST00000401607 IFI27L1Q96BM0 104 aa18.36■□□□□ 0.53
CPNE1-205ENST00000401607 C18orf15Q96N68 181 aa18.36■□□□□ 0.53
CPNE1-205ENST00000401607 H0Y8G0 127 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 IGHV3-53P01767 116 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 OR4C5Q8NGB2 326 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 CMYA5Q8N3K9 4069 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 IGHV4-30-4P0DP06 118 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 EGFEM1PQ0D2K5 195 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 ATOH7Q8N100 152 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 PRO1933Q9H354 126 aa18.35■□□□□ 0.53
CPNE1-205ENST00000401607 MAST4O15021 2626 aa18.34■□□□□ 0.53
CPNE1-205ENST00000401607 LINC01545Q5VT33 79 aa18.34■□□□□ 0.53
CPNE1-205ENST00000401607 ZNF479Q96JC4 524 aa18.34■□□□□ 0.53
CPNE1-205ENST00000401607 TRAV4A0A0B4J268 109 aa18.33■□□□□ 0.53
CPNE1-205ENST00000401607 Q9UF83 564 aa18.33■□□□□ 0.53
CPNE1-205ENST00000401607 C20orf202A1L168 122 aa18.32■□□□□ 0.52
CPNE1-205ENST00000401607 PKIAP61925 76 aa18.32■□□□□ 0.52
CPNE1-205ENST00000401607 DEFB104AQ8WTQ1 72 aa18.32■□□□□ 0.52
CPNE1-205ENST00000401607 VAMP8Q9BV40 100 aa18.32■□□□□ 0.52
CPNE1-205ENST00000401607 KIR2DL4Q99706 377 aa18.32■□□□□ 0.52
CPNE1-205ENST00000401607 GAGE12BA1L429 117 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 GAGE7O76087 117 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 GAGE12FP0CL80 117 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 GAGE12GP0CL81 117 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 GAGE12IP0CL82 117 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 DEFB135Q30KP9 77 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 TOMM6Q96B49 74 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 PAM16Q9Y3D7 125 aa18.31■□□□□ 0.52
CPNE1-205ENST00000401607 SMIM9A6NGZ8 99 aa18.3■□□□□ 0.52
CPNE1-205ENST00000401607 STAB1Q9NY15 2570 aa18.3■□□□□ 0.52
CPNE1-205ENST00000401607 NEXN-AS1Q8NBZ9 246 aa18.3■□□□□ 0.52
CPNE1-205ENST00000401607 PMCHL2Q9BQD1 86 aa18.3■□□□□ 0.52
CPNE1-205ENST00000401607 EMP1P54849 157 aa18.29■□□□□ 0.52
CPNE1-205ENST00000401607 C2orf66Q6UXQ4 117 aa18.29■□□□□ 0.52
CPNE1-205ENST00000401607 ATP5LO75964 103 aa18.28■□□□□ 0.52
CPNE1-205ENST00000401607 TSHBP01222 138 aa18.28■□□□□ 0.52
CPNE1-205ENST00000401607 TSTD3H0UI37 97 aa18.27■□□□□ 0.52
CPNE1-205ENST00000401607 I3L3M4 83 aa18.27■□□□□ 0.52
CPNE1-205ENST00000401607 MAJINQ3KP22 176 aa18.27■□□□□ 0.52
CPNE1-205ENST00000401607 LGALS9CQ6DKI2 356 aa18.27■□□□□ 0.52
CPNE1-205ENST00000401607 TNFRSF18Q9Y5U5 241 aa18.27■□□□□ 0.52
CPNE1-205ENST00000401607 RIPPLY3P57055 190 aa18.27■□□□□ 0.51
CPNE1-205ENST00000401607 TRGV2A0A075B6R0 118 aa18.26■□□□□ 0.51
CPNE1-205ENST00000401607 DNAJC30Q96LL9 226 aa18.26■□□□□ 0.51
CPNE1-205ENST00000401607 TRAV9-2A0A087WT02 112 aa18.25■□□□□ 0.51
CPNE1-205ENST00000401607 G3V4G9 280 aa18.25■□□□□ 0.51
CPNE1-205ENST00000401607 RHOHQ15669 191 aa18.25■□□□□ 0.51
CPNE1-205ENST00000401607 LINC00612Q8N6U2 182 aa18.25■□□□□ 0.51
CPNE1-205ENST00000401607 SPATA45Q537H7 98 aa18.24■□□□□ 0.51
CPNE1-205ENST00000401607 SCGB3A1Q96QR1 104 aa18.24■□□□□ 0.51
CPNE1-205ENST00000401607 CYSLTR1Q9Y271 337 aa18.24■□□□□ 0.51
CPNE1-205ENST00000401607 OR11H2Q8NH07 326 aa18.23■□□□□ 0.51
CPNE1-205ENST00000401607 TP53TG1Q9Y2A0 90 aa18.23■□□□□ 0.51
CPNE1-205ENST00000401607 K7EQD1 137 aa18.22■□□□□ 0.51
CPNE1-205ENST00000401607 PRSS1P07477 247 aa18.22■□□□□ 0.51
CPNE1-205ENST00000401607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-205ENST00000401607 G0S2P27469 103 aa18.22■□□□□ 0.51
CPNE1-205ENST00000401607 A8MZ25 164 aa18.21■□□□□ 0.51
CPNE1-205ENST00000401607 CIDEAO60543 219 aa18.21■□□□□ 0.51
CPNE1-205ENST00000401607 RPL39P62891 51 aaKnown RBP18.21■□□□□ 0.51
CPNE1-205ENST00000401607 ODF1Q14990 250 aa18.21■□□□□ 0.51
CPNE1-205ENST00000401607 SLC25A29Q8N8R3 303 aa18.21■□□□□ 0.51
CPNE1-205ENST00000401607 RNF183Q96D59 192 aa18.21■□□□□ 0.51
CPNE1-205ENST00000401607 DKK2Q9UBU2 259 aa18.21■□□□□ 0.51
CPNE1-205ENST00000401607 ZMAT5Q9UDW3 170 aaKnown RBP18.21■□□□□ 0.51
CPNE1-205ENST00000401607 LINC00587B1AMM8 73 aa18.2■□□□□ 0.5
CPNE1-205ENST00000401607 ERASQ7Z444 233 aa18.2■□□□□ 0.5
CPNE1-205ENST00000401607 TRBV10-1A0A0K0K1A3 114 aa18.19■□□□□ 0.5
CPNE1-205ENST00000401607 hDV102S1A0JD36 115 aa18.19■□□□□ 0.5
CPNE1-205ENST00000401607 SAMD5Q5TGI4 173 aa18.19■□□□□ 0.5
CPNE1-205ENST00000401607 IGHV4-28A0A0C4DH34 117 aa18.19■□□□□ 0.5
CPNE1-205ENST00000401607 LINC01549A6NIU2 74 aa18.18■□□□□ 0.5
CPNE1-205ENST00000401607 IGIPA6NJ69 53 aa18.18■□□□□ 0.5
CPNE1-205ENST00000401607 DEFB130BP0DP73 79 aa18.18■□□□□ 0.5
CPNE1-205ENST00000401607 DEFB130AP0DP74 79 aa18.18■□□□□ 0.5
CPNE1-205ENST00000401607 ZMAT4Q9H898 229 aa18.18■□□□□ 0.5
CPNE1-205ENST00000401607 DDTP30046 118 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 FHL2Q14192 279 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 Q6ZN92 141 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 Q8NAQ8 132 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 C20orf203Q8NBC4 194 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 ZNRF2Q8NHG8 242 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 COL6A5A8TX70 2615 aa18.17■□□□□ 0.5
CPNE1-205ENST00000401607 PHLDA1Q8WV24 401 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-205ENST00000401607 TRBV7-3A0A075B6L6 115 aa18.16■□□□□ 0.5
CPNE1-205ENST00000401607 IGHV3-38A0A0C4DH36 116 aa18.16■□□□□ 0.5
CPNE1-205ENST00000401607 DEFB4AO15263 64 aa18.16■□□□□ 0.5
CPNE1-205ENST00000401607 MIFP14174 115 aa18.16■□□□□ 0.5
CPNE1-205ENST00000401607 FAM222AQ5U5X8 452 aa18.16■□□□□ 0.5
CPNE1-205ENST00000401607 BAALCQ8WXS3 180 aa18.16■□□□□ 0.5
CPNE1-205ENST00000401607 ANK2Q01484 3957 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms