RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CUBNO60494 3623 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 EIF4EBP3O60516 100 aaPredicted RBP12.85□□□□□ -0.35
PTPRA-205ENST00000399903 PAPPA-AS1Q5QFB9 102 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 ATP6V0E1O15342 81 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 NPBQ8NG41 125 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 NRGNQ92686 78 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 PRORYQ9H606 182 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 SDHAF1A6NFY7 115 aa12.84□□□□□ -0.35
PTPRA-205ENST00000399903 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
PTPRA-205ENST00000399903 TRIAP1O43715 76 aa12.84□□□□□ -0.35
PTPRA-205ENST00000399903 IGKV3-20P01619 116 aa12.84□□□□□ -0.35
PTPRA-205ENST00000399903 TRAV12-3A0A0B4J271 114 aa12.83□□□□□ -0.36
PTPRA-205ENST00000399903 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.36
PTPRA-205ENST00000399903 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
PTPRA-205ENST00000399903 TMEM263Q8WUH6 116 aaKnown RBP12.83□□□□□ -0.36
PTPRA-205ENST00000399903 PRB1P04280 392 aa12.83□□□□□ -0.36
PTPRA-205ENST00000399903 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 TMEM219Q86XT9 240 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 C9orf47Q6ZRZ4 202 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 MUC4Q99102 2169 aa12.82□□□□□ -0.36
PTPRA-205ENST00000399903 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 GPHB5Q86YW7 130 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 CCDC140Q96MF4 163 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 PPDPFQ9H3Y8 114 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 PRRC2AP48634 2157 aaKnown RBP12.81□□□□□ -0.36
PTPRA-205ENST00000399903 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 IGIPA6NJ69 53 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 CCDC168Q8NDH2 2452 aa12.81□□□□□ -0.36
PTPRA-205ENST00000399903 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
PTPRA-205ENST00000399903 ODF3BA8MYP8 253 aa12.8□□□□□ -0.36
PTPRA-205ENST00000399903 SAA4P35542 130 aa12.8□□□□□ -0.36
PTPRA-205ENST00000399903 ID1P41134 155 aa12.8□□□□□ -0.36
PTPRA-205ENST00000399903 UBE2E1P51965 193 aa12.8□□□□□ -0.36
PTPRA-205ENST00000399903 ZFAND2AQ8N6M9 145 aa12.8□□□□□ -0.36
PTPRA-205ENST00000399903 NAV2Q8IVL1 2488 aa12.79□□□□□ -0.36
PTPRA-205ENST00000399903 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
PTPRA-205ENST00000399903 TRBV10-2A0A0K0K1G8 114 aa12.79□□□□□ -0.36
PTPRA-205ENST00000399903 VCYO14598 125 aa12.79□□□□□ -0.36
PTPRA-205ENST00000399903 BRI3O95415 125 aa12.79□□□□□ -0.36
PTPRA-205ENST00000399903 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
PTPRA-205ENST00000399903 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
PTPRA-205ENST00000399903 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
PTPRA-205ENST00000399903 ANKRD17O75179 2603 aaKnown RBP12.79□□□□□ -0.36
PTPRA-205ENST00000399903 FAM236AA0A1B0GUQ0 79 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 FAM236BA0A1B0GV22 79 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 M0R1W7 72 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 LGALS9O00182 355 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 DAND5Q8N907 189 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 A8MZ25 164 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 EEF1AKMT3Q96AZ1 226 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 CENPVL3A0A0U1RRI6 287 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 COX6CP09669 75 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 HTN1P15515 57 aa12.78□□□□□ -0.36
PTPRA-205ENST00000399903 MRPL23Q16540 153 aaKnown RBP12.78□□□□□ -0.36
PTPRA-205ENST00000399903 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.77□□□□□ -0.36
PTPRA-205ENST00000399903 RNASE3P12724 160 aaKnown RBP12.77□□□□□ -0.36
PTPRA-205ENST00000399903 PPP1R17O96001 155 aa12.77□□□□□ -0.37
PTPRA-205ENST00000399903 LMO4P61968 165 aa12.77□□□□□ -0.37
PTPRA-205ENST00000399903 Q8N9W7 124 aa12.77□□□□□ -0.37
PTPRA-205ENST00000399903 AMELXQ99217 191 aa12.77□□□□□ -0.37
PTPRA-205ENST00000399903 H7C423 109 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 M0R2P5 195 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 ZNF876PQ49A33 203 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
PTPRA-205ENST00000399903 TRGV11A0A075B6L2 103 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 DUX5Q96PT3 197 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 FBN2P35556 2912 aa12.76□□□□□ -0.37
PTPRA-205ENST00000399903 UNQ9165/PRO28630Q6UXU0 137 aa12.75□□□□□ -0.37
PTPRA-205ENST00000399903 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
PTPRA-205ENST00000399903 ICOSQ9Y6W8 199 aa12.75□□□□□ -0.37
PTPRA-205ENST00000399903 RPL13AP40429 203 aaKnown RBP12.75□□□□□ -0.37
PTPRA-205ENST00000399903 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
PTPRA-205ENST00000399903 TRBV12-3P01733 135 aa12.75□□□□□ -0.37
PTPRA-205ENST00000399903 CEMP1Q6PRD7 247 aaPredicted RBP12.75□□□□□ -0.37
PTPRA-205ENST00000399903 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
PTPRA-205ENST00000399903 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 LEPROTO15243 131 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 LY6EQ16553 131 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 P0DMU3 169 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
PTPRA-205ENST00000399903 MYO9AB2RTY4 2548 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 A0A0B4J2C4 111 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 C9orf153Q5TBE3 101 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 MAPK1IP1LQ8NDC0 245 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 RS1O15537 224 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
PTPRA-205ENST00000399903 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 M0QXV9 152 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 POLR2KP53803 58 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms