RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
SOCS6-201ENST00000397942 SS18Q15532 418 aa9.5□□□□□ -0.89
SOCS6-201ENST00000397942 FSTL3O95633 263 aa9.5□□□□□ -0.89
SOCS6-201ENST00000397942 EBI3Q14213 229 aa9.5□□□□□ -0.89
SOCS6-201ENST00000397942 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 SPAG8Q99932 426 aaPredicted RBP9.49□□□□□ -0.89
SOCS6-201ENST00000397942 NXPH4O95158 308 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 LINC00310P59036 64 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 MGAQ8IWI9 3026 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 ATG2AQ2TAZ0 1938 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 LY6LH3BQJ8 138 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
SOCS6-201ENST00000397942 E9PLD3 99 aa9.48□□□□□ -0.89
SOCS6-201ENST00000397942 IGF1P05019 195 aa9.48□□□□□ -0.89
SOCS6-201ENST00000397942 LRP4O75096 1905 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 H3BMM0 161 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 HERVK_113P63121 156 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 UBE2WQ96B02 151 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 Q9H8V8 135 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 LAMTOR3Q9UHA4 124 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 TRAV12-1A0A0B4J245 112 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 NOP10Q9NPE3 64 aaKnown RBP9.47□□□□□ -0.89
SOCS6-201ENST00000397942 IGHV4OR15-8A0A075B7B6 117 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 A0A087WW49 117 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 A0A0J9YX75 114 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 F5H768 121 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 CCL24O00175 119 aa9.47□□□□□ -0.89
SOCS6-201ENST00000397942 PRB1P04280 392 aa9.46□□□□□ -0.89
SOCS6-201ENST00000397942 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.9
SOCS6-201ENST00000397942 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.9
SOCS6-201ENST00000397942 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.9
SOCS6-201ENST00000397942 BAALCQ8WXS3 180 aa9.46□□□□□ -0.9
SOCS6-201ENST00000397942 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
SOCS6-201ENST00000397942 C20orf203Q8NBC4 194 aa9.45□□□□□ -0.9
SOCS6-201ENST00000397942 HIST1H4AP62805 103 aaKnown RBP9.45□□□□□ -0.9
SOCS6-201ENST00000397942 VPS13AQ96RL7 3174 aa9.45□□□□□ -0.9
SOCS6-201ENST00000397942 XIRP2A4UGR9 3374 aa9.45□□□□□ -0.9
SOCS6-201ENST00000397942 CARD19Q96LW7 228 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 A6NDX4 124 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 DAD1P61803 113 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
SOCS6-201ENST00000397942 A0A096LPF7 62 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 IGKV2D-26A0A0A0MRZ7 120 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 C19orf84I3L1E1 186 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 Q71RC1 249 aaPredicted RBP9.44□□□□□ -0.9
SOCS6-201ENST00000397942 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 ZFAND2AQ8N6M9 145 aa9.44□□□□□ -0.9
SOCS6-201ENST00000397942 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
SOCS6-201ENST00000397942 TRANK1O15050 2925 aa9.43□□□□□ -0.9
SOCS6-201ENST00000397942 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
SOCS6-201ENST00000397942 CFAP46Q8IYW2 2715 aa9.43□□□□□ -0.9
SOCS6-201ENST00000397942 TNFRSF13BO14836 293 aaPredicted RBP9.43□□□□□ -0.9
SOCS6-201ENST00000397942 TEN1Q86WV5 123 aa9.42□□□□□ -0.9
SOCS6-201ENST00000397942 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
SOCS6-201ENST00000397942 SMAD5-AS1Q9Y6J3 95 aa9.42□□□□□ -0.9
SOCS6-201ENST00000397942 IGHG4P01861 327 aa9.42□□□□□ -0.9
SOCS6-201ENST00000397942 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
SOCS6-201ENST00000397942 DEFB113Q30KQ7 82 aa9.42□□□□□ -0.9
SOCS6-201ENST00000397942 IFITM1P13164 125 aa9.41□□□□□ -0.9
SOCS6-201ENST00000397942 ZNF292O60281 2723 aa9.4□□□□□ -0.9
SOCS6-201ENST00000397942 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.9
SOCS6-201ENST00000397942 CLPSL2Q6UWE3 100 aa9.4□□□□□ -0.9
SOCS6-201ENST00000397942 XCL1P47992 114 aa9.4□□□□□ -0.91
SOCS6-201ENST00000397942 CDSNQ15517 529 aa9.4□□□□□ -0.91
SOCS6-201ENST00000397942 DAND5Q8N907 189 aa9.4□□□□□ -0.91
SOCS6-201ENST00000397942 K7EQG2 157 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 RNF152Q8N8N0 203 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 PTH2Q96A98 100 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 TMEM89A2RUT3 159 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 C11orf71Q6IPW1 123 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
SOCS6-201ENST00000397942 Q8N6K4 173 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 SOCS3O14543 225 aa9.39□□□□□ -0.91
SOCS6-201ENST00000397942 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 C15orf53Q8NAA6 179 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 IGHV3-30-3P0DP02 117 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 GAS8-AS1O95177 125 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 SLC25A29Q8N8R3 303 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
SOCS6-201ENST00000397942 CHD6Q8TD26 2715 aa9.37□□□□□ -0.91
SOCS6-201ENST00000397942 PRSS47A8MTI9 375 aa9.37□□□□□ -0.91
SOCS6-201ENST00000397942 J3QKU1 62 aa9.37□□□□□ -0.91
SOCS6-201ENST00000397942 TET2Q6N021 2002 aaPredicted RBP9.37□□□□□ -0.91
SOCS6-201ENST00000397942 A0A0J9YY99 117 aa9.37□□□□□ -0.91
SOCS6-201ENST00000397942 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
SOCS6-201ENST00000397942 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
SOCS6-201ENST00000397942 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
SOCS6-201ENST00000397942 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
SOCS6-201ENST00000397942 C3orf56Q8N813 242 aa9.36□□□□□ -0.91
SOCS6-201ENST00000397942 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
SOCS6-201ENST00000397942 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
SOCS6-201ENST00000397942 C10orf99Q6UWK7 81 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms