RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NPYP01303 97 aa11.94□□□□□ -0.5
TSPAN4-205ENST00000397406 FHL2Q14192 279 aa11.94□□□□□ -0.5
TSPAN4-205ENST00000397406 RAB5BP61020 215 aa11.94□□□□□ -0.5
TSPAN4-205ENST00000397406 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
TSPAN4-205ENST00000397406 RPL39LQ96EH5 51 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-205ENST00000397406 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
TSPAN4-205ENST00000397406 DNAH1Q9P2D7 4330 aa11.93□□□□□ -0.5
TSPAN4-205ENST00000397406 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
TSPAN4-205ENST00000397406 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
TSPAN4-205ENST00000397406 HOXA5P20719 270 aa11.93□□□□□ -0.5
TSPAN4-205ENST00000397406 H7C1H1 209 aa11.92□□□□□ -0.5
TSPAN4-205ENST00000397406 ATP5G1P05496 136 aa11.92□□□□□ -0.5
TSPAN4-205ENST00000397406 P0DMU3 169 aa11.92□□□□□ -0.5
TSPAN4-205ENST00000397406 FAM231AP0DMU4 169 aa11.92□□□□□ -0.5
TSPAN4-205ENST00000397406 FAM231CP0DMU5 169 aa11.92□□□□□ -0.5
TSPAN4-205ENST00000397406 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
TSPAN4-205ENST00000397406 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
TSPAN4-205ENST00000397406 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
TSPAN4-205ENST00000397406 C11orf45Q8TAV5 145 aa11.91□□□□□ -0.5
TSPAN4-205ENST00000397406 NIT2Q9NQR4 276 aa11.91□□□□□ -0.5
TSPAN4-205ENST00000397406 Q9UF83 564 aa11.91□□□□□ -0.5
TSPAN4-205ENST00000397406 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 TRBV6-4A0A1B0GX49 114 aa11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 K7EQD1 137 aa11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 PPP1R17O96001 155 aa11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 Q0VG73 95 aa11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-205ENST00000397406 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-205ENST00000397406 Q6ZTC4 211 aa11.89□□□□□ -0.51
TSPAN4-205ENST00000397406 HYDINQ4G0P3 5121 aa11.89□□□□□ -0.51
TSPAN4-205ENST00000397406 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 LCE6AA0A183 80 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 CRYBA4P53673 196 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 NEXN-AS1Q8NBZ9 246 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 C20orf78Q9BR46 151 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 MAP1LC3AQ9H492 121 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
TSPAN4-205ENST00000397406 SUMO2P61956 95 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-205ENST00000397406 RHOHQ15669 191 aa11.87□□□□□ -0.51
TSPAN4-205ENST00000397406 DNAJC30Q96LL9 226 aa11.87□□□□□ -0.51
TSPAN4-205ENST00000397406 ST20Q9HBF5 79 aa11.87□□□□□ -0.51
TSPAN4-205ENST00000397406 PRO0255Q9UI72 69 aa11.87□□□□□ -0.51
TSPAN4-205ENST00000397406 PLECQ15149 4684 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-205ENST00000397406 IGLV2-18A0A075B6J9 118 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 HTN3P15516 51 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 POLR2KP53803 58 aaKnown RBP11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 URB1-AS1Q96HZ7 61 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 F5H768 121 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 NDUFA6P56556 154 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 LINC00310P59036 64 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 RPL32P62910 135 aaKnown RBP11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 VSIG2Q96IQ7 327 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 PRADC1Q9BSG0 188 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 TMEM70Q9BUB7 260 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
TSPAN4-205ENST00000397406 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
TSPAN4-205ENST00000397406 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
TSPAN4-205ENST00000397406 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 PAX4O43316 350 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 NIT1Q86X76 327 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 Q8N8P6 123 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 EPPK1P58107 5090 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-205ENST00000397406 TRBV27A0A0K0K1C4 114 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 SERF1AO75920 110 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 PMCHP20382 165 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 GAGE1Q13065 139 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 GAGE4Q13068 117 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 GAGE5Q13069 117 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 NEGR1Q7Z3B1 354 aa11.83□□□□□ -0.52
TSPAN4-205ENST00000397406 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 DEFB131BA0A096LNP1 70 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 A0A0J9YY99 117 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 NUPR1O60356 82 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 LINC00614P0C842 121 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 UBE2D3P61077 147 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 UBE2D2P62837 147 aa11.82□□□□□ -0.52
TSPAN4-205ENST00000397406 VCYO14598 125 aa11.81□□□□□ -0.52
TSPAN4-205ENST00000397406 S100A6P06703 90 aa11.81□□□□□ -0.52
TSPAN4-205ENST00000397406 GYPEP15421 78 aa11.81□□□□□ -0.52
TSPAN4-205ENST00000397406 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
TSPAN4-205ENST00000397406 FA2HQ7L5A8 372 aa11.81□□□□□ -0.52
TSPAN4-205ENST00000397406 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
TSPAN4-205ENST00000397406 ESDP10768 282 aa11.8□□□□□ -0.52
TSPAN4-205ENST00000397406 CHCHD1Q96BP2 118 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-205ENST00000397406 I3L3M4 83 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms