RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 FAM222AQ5U5X8 452 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 ZMAT4Q9H898 229 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 VCYO14598 125 aa13.55□□□□□ -0.24
TSPAN4-204ENST00000397404 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
TSPAN4-204ENST00000397404 SMIM2Q9BVW6 85 aa13.55□□□□□ -0.24
TSPAN4-204ENST00000397404 NBEAL2Q6ZNJ1 2754 aa13.55□□□□□ -0.24
TSPAN4-204ENST00000397404 TRBV27A0A0K0K1C4 114 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 GATA1P15976 413 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 DAD1P61803 113 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 IQCJQ1A5X6 159 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 RNASEKQ6P5S7 137 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 ZNF479Q96JC4 524 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 KIR2DL4Q99706 377 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
TSPAN4-204ENST00000397404 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
TSPAN4-204ENST00000397404 K7EQD1 137 aa13.53□□□□□ -0.24
TSPAN4-204ENST00000397404 IFI27P40305 119 aaPredicted RBP13.53□□□□□ -0.24
TSPAN4-204ENST00000397404 POLR2KP53803 58 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-204ENST00000397404 RHOHQ15669 191 aa13.53□□□□□ -0.24
TSPAN4-204ENST00000397404 PRADC1Q9BSG0 188 aa13.53□□□□□ -0.24
TSPAN4-204ENST00000397404 DEFB130BP0DP73 79 aa13.52□□□□□ -0.25
TSPAN4-204ENST00000397404 DEFB130AP0DP74 79 aa13.52□□□□□ -0.25
TSPAN4-204ENST00000397404 TMEM70Q9BUB7 260 aa13.52□□□□□ -0.25
TSPAN4-204ENST00000397404 NACAE9PAV3 2078 aa13.52□□□□□ -0.25
TSPAN4-204ENST00000397404 IGLV2-18A0A075B6J9 118 aa13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 LOC389332A0A1B0GUA5 103 aa13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 SDHAF1A6NFY7 115 aa13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 ATP5G1P05496 136 aa13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 RPL36AP83881 106 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 MRAPQ8TCY5 172 aa13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 RPL36ALQ969Q0 106 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 RPL39LQ96EH5 51 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 B9D2Q9BPU9 175 aa13.51□□□□□ -0.25
TSPAN4-204ENST00000397404 IGHV3-73A0A0B4J1V6 119 aa13.5□□□□□ -0.25
TSPAN4-204ENST00000397404 LINC00310P59036 64 aa13.5□□□□□ -0.25
TSPAN4-204ENST00000397404 LAGE3Q14657 143 aa13.5□□□□□ -0.25
TSPAN4-204ENST00000397404 TRBV7-3A0A075B6L6 115 aa13.49□□□□□ -0.25
TSPAN4-204ENST00000397404 I3L3M4 83 aa13.49□□□□□ -0.25
TSPAN4-204ENST00000397404 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
TSPAN4-204ENST00000397404 NHLRC4P0CG21 123 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-204ENST00000397404 AMTP48728 403 aa13.49□□□□□ -0.25
TSPAN4-204ENST00000397404 PRO0255Q9UI72 69 aa13.49□□□□□ -0.25
TSPAN4-204ENST00000397404 PRB2P02812 416 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 FHL2Q14192 279 aa13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 DAZ4Q86SG3 579 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 URB1-AS1Q96HZ7 61 aa13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 HIST1H2BLQ99880 126 aa13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 DAZ3Q9NR90 486 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 SLC25A29Q8N8R3 303 aa13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 NEXN-AS1Q8NBZ9 246 aa13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 HHLA3Q9XRX5 114 aa13.48□□□□□ -0.25
TSPAN4-204ENST00000397404 HBDP02042 147 aa13.47□□□□□ -0.25
TSPAN4-204ENST00000397404 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
TSPAN4-204ENST00000397404 HSPB8Q9UJY1 196 aa13.47□□□□□ -0.25
TSPAN4-204ENST00000397404 LOC105371267A0A1B0GV96 52 aa13.46□□□□□ -0.25
TSPAN4-204ENST00000397404 FCER1GP30273 86 aa13.46□□□□□ -0.25
TSPAN4-204ENST00000397404 IGHV1-24A0A0C4DH33 117 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 NUPR1O60356 82 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 FABP4P15090 132 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 Q6ZSN1 163 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 SH2D6Q7Z4S9 175 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 RETNQ9HD89 108 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 DNHD1Q96M86 4753 aa13.45□□□□□ -0.26
TSPAN4-204ENST00000397404 DEFB4AO15263 64 aa13.44□□□□□ -0.26
TSPAN4-204ENST00000397404 LEPROTL1O95214 131 aa13.44□□□□□ -0.26
TSPAN4-204ENST00000397404 H3BNG1 76 aa13.43□□□□□ -0.26
TSPAN4-204ENST00000397404 CRYBA4P53673 196 aa13.43□□□□□ -0.26
TSPAN4-204ENST00000397404 CELA1Q9UNI1 258 aa13.43□□□□□ -0.26
TSPAN4-204ENST00000397404 A0A0J9YWU9 116 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 NUDT3O95989 172 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 AKR1D1P51857 326 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 UBE2D3P61077 147 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 UBE2D2P62837 147 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 COTL1Q14019 142 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 C12orf74Q32Q52 190 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 ZNRF2Q8NHG8 242 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 C11orf45Q8TAV5 145 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
TSPAN4-204ENST00000397404 IFITM10A6NMD0 228 aa13.41□□□□□ -0.26
TSPAN4-204ENST00000397404 FAM19A2Q8N3H0 131 aa13.41□□□□□ -0.26
TSPAN4-204ENST00000397404 TRAV26-1A0A087WT03 109 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 PAX4O43316 350 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 ATP5LO75964 103 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 P0DMU3 169 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 FAM231AP0DMU4 169 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 FAM231CP0DMU5 169 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 CYSLTR1Q9Y271 337 aa13.4□□□□□ -0.26
TSPAN4-204ENST00000397404 NPSP0C0P6 89 aa13.39□□□□□ -0.27
TSPAN4-204ENST00000397404 LINC00694P0DN24 101 aa13.39□□□□□ -0.27
TSPAN4-204ENST00000397404 TOMM6Q96B49 74 aa13.39□□□□□ -0.27
TSPAN4-204ENST00000397404 OR10D4PQ8NGN7 298 aa13.38□□□□□ -0.27
TSPAN4-204ENST00000397404 F5H768 121 aa13.37□□□□□ -0.27
TSPAN4-204ENST00000397404 TSHBP01222 138 aa13.37□□□□□ -0.27
TSPAN4-204ENST00000397404 BTF3P20290 206 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-204ENST00000397404 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
TSPAN4-204ENST00000397404 A0A096LNJ9 63 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms