RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ZC2HC1AQ96GY0 325 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 SGK494Q96LW2 274 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 TRAV34A0A0B4J273 112 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 A0A0J9YXV3 536 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 LYRM1O43325 122 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 CRPP02741 224 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 S100A4P26447 101 aaKnown RBP5.98□□□□□ -1.45
NEDD9-203ENST00000397378 RAB5BP61020 215 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 MTURNQ8N3F0 131 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 OR2G3Q8NGZ4 309 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 SMIM12Q96EX1 92 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 RNF185Q96GF1 192 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 VCX2Q9H322 139 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 JPT2Q9H910 190 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 IL36BQ9NZH7 164 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 PSG8Q9UQ74 426 aa5.98□□□□□ -1.45
NEDD9-203ENST00000397378 IGKV3D-20A0A0C4DH25 116 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 TRBV10-1A0A0K0K1A3 114 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 A0A1B0GV72 72 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 K7EQM0 130 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 ARPC5O15511 151 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 HLA-DQA1P01909 254 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 TCRAP04437 139 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 DDTP30046 118 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 MIAQ16674 131 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 C9orf62Q8N4C0 152 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 C5orf17Q8NAS9 161 aa5.97□□□□□ -1.45
NEDD9-203ENST00000397378 TRBV7-3A0A075B6L6 115 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 A0A1W2PPV4 95 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 C5orf52A6NGY3 159 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 TMEM262E9PQX1 116 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 H0YIZ8 118 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 RPS20P60866 119 aaKnown RBP5.96□□□□□ -1.46
NEDD9-203ENST00000397378 UBE2D3P61077 147 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 UBE2D2P62837 147 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.46
NEDD9-203ENST00000397378 TEX261Q6UWH6 196 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 C15orf54Q8N8G6 183 aa5.96□□□□□ -1.46
NEDD9-203ENST00000397378 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
NEDD9-203ENST00000397378 TRBV6-8A0A0A6YYG3 113 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 ANGP03950 147 aaKnown RBP5.95□□□□□ -1.46
NEDD9-203ENST00000397378 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
NEDD9-203ENST00000397378 MPV17L2Q567V2 206 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 Q5BKY6 102 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 FAM74A4Q5TZK3 123 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 KRTAP26-1Q6PEX3 210 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 SCGB1C1Q8TD33 95 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 PRR34Q9NV39 138 aa5.95□□□□□ -1.46
NEDD9-203ENST00000397378 A0A087WYN8 130 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 FABP5P3A8MUU1 101 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 F8WDY8 70 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 H3BVH4 76 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 ZNF25P17030 456 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-203ENST00000397378 RAB5CP51148 216 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 LRRC37A5PQ49AS3 106 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 PRNTQ86SH4 94 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 OR11H4Q8NGC9 324 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 OR10G8Q8NGN5 311 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 SFRP2Q96HF1 295 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 CCDC32Q9BV29 185 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 HSPB11Q9Y547 144 aa5.94□□□□□ -1.46
NEDD9-203ENST00000397378 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 A0A087WWL8 130 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 B4DEV8 164 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 HMGB3O15347 200 aaKnown RBP5.93□□□□□ -1.46
NEDD9-203ENST00000397378 SIX6O95475 246 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 ARMS2P0C7Q2 107 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 ARL14EPLP0DKL9 152 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 CYCSP99999 105 aaKnown RBP5.93□□□□□ -1.46
NEDD9-203ENST00000397378 IFITM3Q01628 133 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 EPDR1Q9UM22 224 aa5.93□□□□□ -1.46
NEDD9-203ENST00000397378 IGHV3-64A0A075B6Q5 118 aa5.92□□□□□ -1.46
NEDD9-203ENST00000397378 PHOX2AO14813 284 aa5.92□□□□□ -1.46
NEDD9-203ENST00000397378 SUMO1P63165 101 aaKnown RBP5.92□□□□□ -1.46
NEDD9-203ENST00000397378 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
NEDD9-203ENST00000397378 C7orf33Q8WU49 177 aa5.92□□□□□ -1.46
NEDD9-203ENST00000397378 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
NEDD9-203ENST00000397378 KIF25-AS1Q9Y6Z4 181 aa5.92□□□□□ -1.46
NEDD9-203ENST00000397378 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-203ENST00000397378 FAM240BA0A1B0GVZ2 78 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 GCHFRP30047 84 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 PPP1R1CQ8WVI7 109 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 CHCHD5Q9BSY4 110 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 SMIM3Q9BZL3 60 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 PHLDA3Q9Y5J5 127 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
NEDD9-203ENST00000397378 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 M0R143 59 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 SLPIP03973 132 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 TPT1P13693 172 aaKnown RBP5.9□□□□□ -1.46
NEDD9-203ENST00000397378 RPL12P30050 165 aaKnown RBP5.9□□□□□ -1.46
NEDD9-203ENST00000397378 TMEM97Q5BJF2 176 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 ZFP82Q8N141 532 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 LINC00269Q8N2A0 174 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms