RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
NUP50-202ENST00000396096 OR11H2Q8NH07 326 aa12.28□□□□□ -0.44
NUP50-202ENST00000396096 IGLV4-69A0A075B6H9 119 aa12.27□□□□□ -0.44
NUP50-202ENST00000396096 RNASE1P07998 156 aaKnown RBP12.27□□□□□ -0.44
NUP50-202ENST00000396096 CST9LQ9H4G1 147 aa12.27□□□□□ -0.44
NUP50-202ENST00000396096 A8MWV9 139 aa12.27□□□□□ -0.45
NUP50-202ENST00000396096 I3L3M4 83 aa12.27□□□□□ -0.45
NUP50-202ENST00000396096 CCL24O00175 119 aa12.27□□□□□ -0.45
NUP50-202ENST00000396096 CD28P10747 220 aa12.27□□□□□ -0.45
NUP50-202ENST00000396096 HIST2H2BDQ6DRA6 164 aa12.27□□□□□ -0.45
NUP50-202ENST00000396096 ZNF469Q96JG9 3925 aaPredicted RBP12.27□□□□□ -0.45
NUP50-202ENST00000396096 TENM4Q6N022 2769 aa12.27□□□□□ -0.45
NUP50-202ENST00000396096 TLN2Q9Y4G6 2542 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 MYMXA0A1B0GTQ4 84 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 INSP01308 110 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 CEND1Q8N111 149 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 YAE1D1Q9NRH1 226 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 AKAP9Q99996 3911 aa12.26□□□□□ -0.45
NUP50-202ENST00000396096 P0DMU3 169 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 GCSHP23434 173 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 FXYD2P54710 66 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 C11orf72Q8NBR9 251 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
NUP50-202ENST00000396096 C20orf203Q8NBC4 194 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 SPXQ9BT56 116 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
NUP50-202ENST00000396096 PDZD2O15018 2839 aa12.25□□□□□ -0.45
NUP50-202ENST00000396096 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
NUP50-202ENST00000396096 C11orf86A6NJI1 115 aa12.24□□□□□ -0.45
NUP50-202ENST00000396096 HTN1P15515 57 aa12.24□□□□□ -0.45
NUP50-202ENST00000396096 LINC01006Q8NI28 216 aa12.24□□□□□ -0.45
NUP50-202ENST00000396096 PRADC1Q9BSG0 188 aa12.24□□□□□ -0.45
NUP50-202ENST00000396096 K7EP13 123 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 SCGB2A2Q13296 93 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 LINC01587Q99440 93 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
NUP50-202ENST00000396096 NACAE9PAV3 2078 aa12.23□□□□□ -0.45
NUP50-202ENST00000396096 SONP18583 2426 aaKnown RBP12.22□□□□□ -0.45
NUP50-202ENST00000396096 TRBV7-3A0A075B6L6 115 aa12.22□□□□□ -0.45
NUP50-202ENST00000396096 C11orf44Q8N8P7 122 aa12.22□□□□□ -0.45
NUP50-202ENST00000396096 H3BUT2 72 aa12.21□□□□□ -0.45
NUP50-202ENST00000396096 RHODO00212 210 aa12.21□□□□□ -0.45
NUP50-202ENST00000396096 PRM2P04554 102 aa12.21□□□□□ -0.45
NUP50-202ENST00000396096 HERVK_113P61574 105 aa12.21□□□□□ -0.45
NUP50-202ENST00000396096 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.45
NUP50-202ENST00000396096 NFE4Q86UQ8 179 aa12.21□□□□□ -0.45
NUP50-202ENST00000396096 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
NUP50-202ENST00000396096 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 RS1O15537 224 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 PROK1P58294 105 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 GTF2H5Q6ZYL4 71 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 STHQ8IWL8 128 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 RAB37Q96AX2 223 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 PYGO1Q9Y3Y4 419 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 IGHV3-73A0A0B4J1V6 119 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 A0A1W2PPM0 123 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 CMC4P56277 68 aaPredicted RBP12.19□□□□□ -0.46
NUP50-202ENST00000396096 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 HIST1H4GQ99525 98 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 TNFRSF18Q9Y5U5 241 aa12.19□□□□□ -0.46
NUP50-202ENST00000396096 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
NUP50-202ENST00000396096 K7EP34 96 aa12.18□□□□□ -0.46
NUP50-202ENST00000396096 IGHV3-53P01767 116 aa12.18□□□□□ -0.46
NUP50-202ENST00000396096 HILS1P60008 231 aa12.18□□□□□ -0.46
NUP50-202ENST00000396096 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
NUP50-202ENST00000396096 NDUFA7O95182 113 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 CRYBA4P53673 196 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 EMP1P54849 157 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 Q6ZSN1 163 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 C1orf158Q8N1D5 194 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 ZNF418Q8TF45 676 aaPredicted RBP12.17□□□□□ -0.46
NUP50-202ENST00000396096 IGLV4-3A0A075B6K6 122 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
NUP50-202ENST00000396096 XCL2Q9UBD3 114 aa12.17□□□□□ -0.46
NUP50-202ENST00000396096 A0A1B0GWB2 263 aa12.16□□□□□ -0.46
NUP50-202ENST00000396096 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
NUP50-202ENST00000396096 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
NUP50-202ENST00000396096 MRPL16Q9NX20 251 aaKnown RBP12.16□□□□□ -0.46
NUP50-202ENST00000396096 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
NUP50-202ENST00000396096 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.46
NUP50-202ENST00000396096 K7ERJ3 54 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 AZU1P20160 251 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 TMEM170BQ5T4T1 132 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 FABP2P12104 132 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 AMELXQ99217 191 aa12.14□□□□□ -0.47
NUP50-202ENST00000396096 VCX2Q9H322 139 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms