RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 C17orf77Q96MU5 243 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 IGHV3-53P01767 116 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 UTF1Q5T230 341 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 GATD1Q8NB37 220 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 IL17DQ8TAD2 202 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TIMM21Q9BVV7 248 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TP53TG1Q9Y2A0 90 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 MRPL23Q16540 153 aaKnown RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 SPANXDQ9BXN6 97 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 IGLV2-11P01706 119 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 IGLC3P0DOY3 106 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 CKS1BP61024 79 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TRBV6-5A0A0K0K1A5 114 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 RBMY1BA6NDE4 496 aaKnown RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 RBMY1EA6NEQ0 496 aaKnown RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 RBMY1DP0C7P1 496 aaKnown RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 RBMY1A1P0DJD3 496 aaKnown RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 CXCL5P42830 114 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 HERV-K104P63124 156 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 C8orf49Q96NF6 230 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TRAV4A0A0B4J268 109 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 IFITM1P13164 125 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 NSUN5P1Q3KNT7 163 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 RMI2Q96E14 147 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TMEM243Q9BU79 118 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TMEM262E9PQX1 116 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 DAD1P61803 113 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 RASL10AQ92737 203 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 PRO0255Q9UI72 69 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 MRPS12O15235 138 aaKnown RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 IGLV2-8P01709 118 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 APRG1Q8IVJ8 170 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 PRSS47A8MTI9 375 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 MTURNQ8N3F0 131 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 ZNF664Q8N3J9 261 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 ORAOV1Q8WV07 137 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 LOC107984156A0A0G2JMH3 177 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 MIFP14174 115 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 C6orf226Q5I0X4 101 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 ARL17AQ8IVW1 177 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 LINC01006Q8NI28 216 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 NRGNQ92686 78 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 CITED2Q99967 270 aaPredicted RBP2.56□□□□□ -2
VPS13C-203ENST00000395896 C16orf95Q9H693 158 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 SMAD5-AS1Q9Y6J3 95 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 TMEM95Q3KNT9 176 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 Q8N1Y9 231 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 SLC25A20O43772 301 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 CFAP161Q6P656 301 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 VPS25Q9BRG1 176 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 HIGD1BQ9P298 99 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 IGKV3D-20A0A0C4DH25 116 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 ATP5G1P05496 136 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 ATOH7Q8N100 152 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 MUC21A0A0G2JKD1 596 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 MUC21A0A140T8X8 626 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 TRBV6-4A0A1B0GX49 114 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 Q6ZSV7 163 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 PTH2Q96A98 100 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 FLG2Q5D862 2391 aaPredicted RBP2.55□□□□□ -2
VPS13C-203ENST00000395896 PYGO1Q9Y3Y4 419 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 F8W735 103 aaPredicted RBP2.55□□□□□ -2
VPS13C-203ENST00000395896 CITED1Q99966 193 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 MAP6D1Q9H9H5 199 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 SLURP1P55000 103 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 Q6ZWC4 215 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 PRIMA1Q86XR5 153 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 ZNF702PQ9H963 129 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 PDZD2O15018 2839 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 A0A087WWL8 130 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 NPYP01303 97 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 DEFB130BP0DP73 79 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 DEFB130AP0DP74 79 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
VPS13C-203ENST00000395896 BBC3Q96PG8 261 aaPredicted RBP2.54□□□□□ -2
VPS13C-203ENST00000395896 MRPL35Q9NZE8 188 aaKnown RBP2.54□□□□□ -2
VPS13C-203ENST00000395896 IGLV1-51P01701 117 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 DEFB136Q30KP8 78 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 TRAV12-2A0A075B6T6 113 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 DLX4Q92988 240 aaPredicted RBP2.54□□□□□ -2
VPS13C-203ENST00000395896 U3KQK5 164 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 C20orf203Q8NBC4 194 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 COX11Q9Y6N1 276 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 H3BQ85 93 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 TOMM6Q96B49 74 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 K7EP13 123 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 LINC01548A6NM66 108 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 EMP1P54849 157 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 HHLA3Q9XRX5 114 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 C10orf126Q8N4M7 172 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 ZNRF2Q8NHG8 242 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 LEPROTO15243 131 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 CSDC2Q9Y534 153 aaKnown RBP2.54□□□□□ -2
VPS13C-203ENST00000395896 CSMD2Q7Z408 3487 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 IGLL1P15814 213 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 ZNF479Q96JC4 524 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 TP53TG3Q9ULZ0 132 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 K7EQD1 137 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms