RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SRSF2Q01130 221 aaKnown RBP4.36□□□□□ -1.71
RFFL-202ENST00000394597 MRPL36Q9P0J6 103 aaKnown RBP4.36□□□□□ -1.71
RFFL-202ENST00000394597 NSUN5P1Q3KNT7 163 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 Q6Q795 121 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 PIFOQ8TCI5 191 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 FANCD2OSQ96PS1 177 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 TIMM21Q9BVV7 248 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 hADV29S1A0JD25 119 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 H3BT86 120 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 IGHV4-31P0DP07 118 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 ZNF625Q96I27 306 aaPredicted RBP4.36□□□□□ -1.71
RFFL-202ENST00000394597 LINC01619G3V211 115 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 VCYO14598 125 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 CD28P10747 220 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 MUSTN1Q8IVN3 82 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 MRAPQ8TCY5 172 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 ZNF292O60281 2723 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 ARHGAP32A7KAX9 2087 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 IGKV3OR2-268A0A0C4DH90 116 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 PLA2G2AP14555 144 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 CMC4P56277 68 aaPredicted RBP4.35□□□□□ -1.71
RFFL-202ENST00000394597 NACAE9PAV3 2078 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 TRBV7-3A0A075B6L6 115 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 TRAV12-1A0A0B4J245 112 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 WI2-2373I1.2A0A1W2PRP0 233 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 ADARB2-AS1A8MUL3 147 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 MRPS12O15235 138 aaKnown RBP4.35□□□□□ -1.71
RFFL-202ENST00000394597 CRLF1O75462 422 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 ATP5G1P05496 136 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 HRCT1Q6UXD1 115 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 LINC00643Q86TS7 51 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 IGKV1D-37A0A075B6S9 117 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 TRAV25A0A0B4J276 109 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 IGHV7-4-1A0A0J9YVY3 117 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 AJUBAQ96IF1 538 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 C11orf68Q9H3H3 251 aaKnown RBP4.35□□□□□ -1.71
RFFL-202ENST00000394597 PKD1L2Q7Z442 2459 aa4.35□□□□□ -1.71
RFFL-202ENST00000394597 A0A0B4J2C4 111 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 LGALS9O00182 355 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 LINC01548A6NM66 108 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 OXLD1Q5BKU9 147 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 STHQ8IWL8 128 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 Q8N6K4 173 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
RFFL-202ENST00000394597 ICOSQ9Y6W8 199 aa4.34□□□□□ -1.71
RFFL-202ENST00000394597 POLQO75417 2590 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 TMEM89A2RUT3 159 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 RBM3P98179 157 aaKnown RBP4.34□□□□□ -1.72
RFFL-202ENST00000394597 HIST2H2BCQ6DN03 193 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 Q71RC1 249 aaPredicted RBP4.34□□□□□ -1.72
RFFL-202ENST00000394597 WFDC11Q8NEX6 87 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 CLEC2BQ92478 149 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 LINC01587Q99440 93 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 TMEM243Q9BU79 118 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 F8P00451 2351 aa4.34□□□□□ -1.72
RFFL-202ENST00000394597 RBAKDNA6NC62 111 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 RBMY1BA6NDE4 496 aaKnown RBP4.33□□□□□ -1.72
RFFL-202ENST00000394597 RBMY1EA6NEQ0 496 aaKnown RBP4.33□□□□□ -1.72
RFFL-202ENST00000394597 RBMY1DP0C7P1 496 aaKnown RBP4.33□□□□□ -1.72
RFFL-202ENST00000394597 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
RFFL-202ENST00000394597 RBMY1CP0DJD4 496 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 HTN3P15516 51 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
RFFL-202ENST00000394597 S100A7L2Q5SY68 101 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 C1orf159Q96HA4 380 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 TMEM141Q96I45 108 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 A0A096LNJ9 63 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 C11orf86A6NJI1 115 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 IGF1P05019 195 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 Q6YL49 198 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 TMEM86BQ8N661 226 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 NDUFA12Q9UI09 145 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 KLK5Q9Y337 293 aaPredicted RBP4.33□□□□□ -1.72
RFFL-202ENST00000394597 BUB3O43684 328 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 BAALCQ8WXS3 180 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
RFFL-202ENST00000394597 KRTAP10-9P60411 292 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 ZNF876PQ49A33 203 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 ABCA12Q86UK0 2595 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 A0A087WWL8 130 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 A0A0J9YY99 117 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 A0A0U1RQV1 116 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 UBE2E2Q96LR5 201 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 V9GYY9 64 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 USP9YO00507 2555 aaPredicted RBP4.32□□□□□ -1.72
RFFL-202ENST00000394597 COX7CP15954 63 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 HOXD3P31249 432 aaPredicted RBP4.32□□□□□ -1.72
RFFL-202ENST00000394597 SMCPP49901 116 aaPredicted RBP4.32□□□□□ -1.72
RFFL-202ENST00000394597 RPL39LQ96EH5 51 aaKnown RBP4.32□□□□□ -1.72
RFFL-202ENST00000394597 RAI1Q7Z5J4 1906 aaPredicted RBP4.32□□□□□ -1.72
RFFL-202ENST00000394597 SDHAF1A6NFY7 115 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 SOCS3O14543 225 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 CRPP02741 224 aa4.32□□□□□ -1.72
RFFL-202ENST00000394597 MYCNOSP40205 109 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms