RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 IGHV4-30-4P0DP06 118 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 POLR2KP53803 58 aaKnown RBP14.11□□□□□ -0.15
RAB5C-202ENST00000393860 TEX43Q6ZNM6 134 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 OR4C5Q8NGB2 326 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 PMCHL2Q9BQD1 86 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 GAGE12BA1L429 117 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 GAGE7O76087 117 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 GAGE12FP0CL80 117 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 GAGE12GP0CL81 117 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 GAGE12IP0CL82 117 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 ANKRD39Q53RE8 183 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 ZNF479Q96JC4 524 aa14.1□□□□□ -0.15
RAB5C-202ENST00000393860 TRBV6-5A0A0K0K1A5 114 aa14.09□□□□□ -0.15
RAB5C-202ENST00000393860 DAZ2Q13117 558 aaKnown RBP14.09□□□□□ -0.15
RAB5C-202ENST00000393860 ZNF664Q8N3J9 261 aa14.09□□□□□ -0.15
RAB5C-202ENST00000393860 X6R8D5 127 aa14.09□□□□□ -0.15
RAB5C-202ENST00000393860 RHODO00212 210 aa14.09□□□□□ -0.15
RAB5C-202ENST00000393860 APOC4P55056 127 aa14.09□□□□□ -0.15
RAB5C-202ENST00000393860 IFI27L1Q96BM0 104 aa14.08□□□□□ -0.16
RAB5C-202ENST00000393860 PAM16Q9Y3D7 125 aa14.08□□□□□ -0.16
RAB5C-202ENST00000393860 H7C1H1 209 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 VCYO14598 125 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 ORMDL2Q53FV1 153 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 SVIPQ8NHG7 77 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 KIR2DL5BA0A0G2JN68 375 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 KIR2DL5BA0A0G2JPC4 375 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 G3V4G9 280 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 RPL32P62910 135 aaKnown RBP14.07□□□□□ -0.16
RAB5C-202ENST00000393860 LGALS9BQ3B8N2 356 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 MAJINQ3KP22 176 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 KIR2DL5AQ8N109 375 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 VAMP8Q9BV40 100 aa14.07□□□□□ -0.16
RAB5C-202ENST00000393860 PET117Q6UWS5 81 aa14.06□□□□□ -0.16
RAB5C-202ENST00000393860 COL6A5A8TX70 2615 aa14.06□□□□□ -0.16
RAB5C-202ENST00000393860 TRGV2A0A075B6R0 118 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 NDUFAF3Q9BU61 184 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 TRAV4A0A0B4J268 109 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 TRBV27A0A0K0K1C4 114 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 ZFP2Q6ZN57 461 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 NEXN-AS1Q8NBZ9 246 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 KIR2DL4Q99706 377 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 EDA2RQ9HAV5 297 aa14.05□□□□□ -0.16
RAB5C-202ENST00000393860 C20orf202A1L168 122 aa14.04□□□□□ -0.16
RAB5C-202ENST00000393860 TNFRSF18Q9Y5U5 241 aa14.04□□□□□ -0.16
RAB5C-202ENST00000393860 PKD1L1Q8TDX9 2849 aa14.04□□□□□ -0.16
RAB5C-202ENST00000393860 DEFB4AO15263 64 aa14.03□□□□□ -0.16
RAB5C-202ENST00000393860 EGFEM1PQ0D2K5 195 aa14.03□□□□□ -0.16
RAB5C-202ENST00000393860 C2orf66Q6UXQ4 117 aa14.03□□□□□ -0.16
RAB5C-202ENST00000393860 PKIAP61925 76 aa14.03□□□□□ -0.16
RAB5C-202ENST00000393860 LINC01545Q5VT33 79 aa14.03□□□□□ -0.16
RAB5C-202ENST00000393860 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
RAB5C-202ENST00000393860 K7EMI3 77 aa14.02□□□□□ -0.16
RAB5C-202ENST00000393860 TSHBP01222 138 aa14.02□□□□□ -0.16
RAB5C-202ENST00000393860 TOMM6Q96B49 74 aa14.02□□□□□ -0.16
RAB5C-202ENST00000393860 I3L3M4 83 aa14.02□□□□□ -0.17
RAB5C-202ENST00000393860 DEFB130BP0DP73 79 aa14.02□□□□□ -0.17
RAB5C-202ENST00000393860 DEFB130AP0DP74 79 aa14.02□□□□□ -0.17
RAB5C-202ENST00000393860 RIPPLY3P57055 190 aa14.02□□□□□ -0.17
RAB5C-202ENST00000393860 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 IGHV3-38A0A0C4DH36 116 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 TSTD3H0UI37 97 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 PRSS1P07477 247 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 RPL39P62891 51 aaKnown RBP14.01□□□□□ -0.17
RAB5C-202ENST00000393860 SPATA45Q537H7 98 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 PHLDA1Q8WV24 401 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-202ENST00000393860 SCGB3A1Q96QR1 104 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 TP53TG1Q9Y2A0 90 aa14.01□□□□□ -0.17
RAB5C-202ENST00000393860 MDFIQ99750 246 aa14□□□□□ -0.17
RAB5C-202ENST00000393860 hDV102S1A0JD36 115 aa14□□□□□ -0.17
RAB5C-202ENST00000393860 SMIM9A6NGZ8 99 aa14□□□□□ -0.17
RAB5C-202ENST00000393860 ATP5LO75964 103 aa14□□□□□ -0.17
RAB5C-202ENST00000393860 IGHV4-28A0A0C4DH34 117 aa13.99□□□□□ -0.17
RAB5C-202ENST00000393860 K7EQD1 137 aa13.99□□□□□ -0.17
RAB5C-202ENST00000393860 SLC25A29Q8N8R3 303 aa13.99□□□□□ -0.17
RAB5C-202ENST00000393860 DKK2Q9UBU2 259 aa13.99□□□□□ -0.17
RAB5C-202ENST00000393860 CYSLTR1Q9Y271 337 aa13.99□□□□□ -0.17
RAB5C-202ENST00000393860 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
RAB5C-202ENST00000393860 TRAV9-2A0A087WT02 112 aa13.98□□□□□ -0.17
RAB5C-202ENST00000393860 LINC00587B1AMM8 73 aa13.98□□□□□ -0.17
RAB5C-202ENST00000393860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.98□□□□□ -0.17
RAB5C-202ENST00000393860 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
RAB5C-202ENST00000393860 FAM222AQ5U5X8 452 aa13.97□□□□□ -0.17
RAB5C-202ENST00000393860 TRGV4A0A0C4DH28 118 aa13.96□□□□□ -0.17
RAB5C-202ENST00000393860 Q6ZN92 141 aa13.96□□□□□ -0.17
RAB5C-202ENST00000393860 RNF183Q96D59 192 aa13.96□□□□□ -0.17
RAB5C-202ENST00000393860 DNAJC30Q96LL9 226 aa13.96□□□□□ -0.17
RAB5C-202ENST00000393860 ANK2Q01484 3957 aa13.96□□□□□ -0.18
RAB5C-202ENST00000393860 LOC100131303A0A0U1RQF7 123 aa13.96□□□□□ -0.18
RAB5C-202ENST00000393860 ODF1Q14990 250 aa13.96□□□□□ -0.18
RAB5C-202ENST00000393860 RHOHQ15669 191 aa13.96□□□□□ -0.18
RAB5C-202ENST00000393860 SAMD5Q5TGI4 173 aa13.96□□□□□ -0.18
RAB5C-202ENST00000393860 RETNQ9HD89 108 aa13.96□□□□□ -0.18
RAB5C-202ENST00000393860 GAGE12JA6NER3 117 aa13.95□□□□□ -0.18
RAB5C-202ENST00000393860 PRB2P02812 416 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-202ENST00000393860 GAGE1Q13065 139 aa13.95□□□□□ -0.18
RAB5C-202ENST00000393860 GAGE4Q13068 117 aa13.95□□□□□ -0.18
RAB5C-202ENST00000393860 GAGE5Q13069 117 aa13.95□□□□□ -0.18
RAB5C-202ENST00000393860 GAGE13Q4V321 117 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms