RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 PRCDQ00LT1 54 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 ZNF491Q8N8L2 437 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 Q9H3A6 140 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 TRBV19A0A075B6N1 114 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 FFAR1O14842 300 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 NKAPP1Q8N9T2 125 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 NUP210LQ5VU65 1888 aa6.21□□□□□ -1.41
LIMS1-203ENST00000393310 TRIAP1O43715 76 aa6.21□□□□□ -1.41
LIMS1-203ENST00000393310 NUPR1O60356 82 aa6.21□□□□□ -1.41
LIMS1-203ENST00000393310 HLA-DMBP28068 263 aa6.21□□□□□ -1.41
LIMS1-203ENST00000393310 DEFB136Q30KP8 78 aa6.21□□□□□ -1.41
LIMS1-203ENST00000393310 ODF3L1Q8IXM7 274 aa6.21□□□□□ -1.41
LIMS1-203ENST00000393310 C9JCJ5 164 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 SLURP1P55000 103 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 C15orf32Q32M92 178 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 GPHA2Q96T91 129 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 C5orf66Q9H5L9 145 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 EML6Q6ZMW3 1958 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 FAM53AQ6NSI3 398 aaPredicted RBP6.21□□□□□ -1.42
LIMS1-203ENST00000393310 Q6ZS49 121 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 Q8N7P7 452 aa6.21□□□□□ -1.42
LIMS1-203ENST00000393310 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 F2Z2F3 143 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 K7EIL1 84 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 PEX7O00628 323 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 INSP01308 110 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 GYPEP15421 78 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 IFI27P40305 119 aaPredicted RBP6.2□□□□□ -1.42
LIMS1-203ENST00000393310 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
LIMS1-203ENST00000393310 TMEM14EPQ6UXP3 125 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 C15orf62A8K5M9 175 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 LYZL2Q7Z4W2 148 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 LEAP2Q969E1 77 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 FXYD5Q96DB9 178 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 AMELYQ99218 206 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 HTN1P15515 57 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 CRYBA2P53672 197 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 DIAPH2-AS1Q14236 149 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 LINC00528Q8N1L1 170 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 Q8N2B8 174 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 GVQW1Q8N7I0 195 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 IGKV1D-43A0A0B4J1Z2 117 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 WI2-2373I1.2A0A1W2PRP0 233 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 MP68P56378 58 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 MORN5Q5VZ52 161 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 SHANK2-AS3Q9BTD1 123 aa6.2□□□□□ -1.42
LIMS1-203ENST00000393310 DEFB131BA0A096LNP1 70 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 CRYGAP11844 174 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 TRBV5-3A0A0A0MS03 114 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 NDUFA4O00483 81 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 FLNAP21333 2647 aaKnown RBP6.19□□□□□ -1.42
LIMS1-203ENST00000393310 FXYD2P54710 66 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 DEFB135Q30KP9 77 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 SLC25A29Q8N8R3 303 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 TIMM9Q9Y5J7 89 aa6.19□□□□□ -1.42
LIMS1-203ENST00000393310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.18□□□□□ -1.42
LIMS1-203ENST00000393310 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 HCFC1P51610 2035 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 PVRIGQ6DKI7 326 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 Q8N1Y9 231 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 CGB7P0DN87 165 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 DEFB131AP59861 70 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 FHL3Q13643 280 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 PAPPA-AS1Q5QFB9 102 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 FAM104BQ5XKR9 115 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 PRO1854Q9UHT4 67 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 ODF3BA8MYP8 253 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 TCL1BO95988 128 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 MSRB3Q8IXL7 192 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
LIMS1-203ENST00000393310 PSMB8P28062 276 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 CPAMD8Q8IZJ3 1885 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 IGHV4OR15-8A0A075B7B6 117 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 A0A087WW49 117 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 CXCL6P80162 114 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 ZNF818PQ6ZRF7 136 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 PGLYRP4Q96LB8 373 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 TRGV9Q99603 122 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 TRBV27A0A0K0K1C4 114 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 D6R8Y8 96 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 CRPP02741 224 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 MUSTN1Q8IVN3 82 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 RASL10AQ92737 203 aa6.17□□□□□ -1.42
LIMS1-203ENST00000393310 C15orf65H3BRN8 121 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 RHPN1-AS1Q9BWJ2 59 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 C16orf90A8MZG2 172 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 COX7A2LO14548 114 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 LYZP61626 148 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 TNP2Q05952 138 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 GPHB5Q86YW7 130 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 Q96M66 194 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 PIGYQ3MUY2 71 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 KPRPQ5T749 579 aaPredicted RBP6.16□□□□□ -1.42
LIMS1-203ENST00000393310 WDR86Q86TI4 376 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms