RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ZC2HC1BQ5TFG8 222 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 APCDD1LQ8NCL9 501 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 IFI27L1Q96BM0 104 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 WFDC6Q9BQY6 131 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 RPP21Q9H633 154 aaKnown RBP2.49□□□□□ -2.01
XRN1-202ENST00000392981 XAGE1AQ9HD64 81 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 ARID1AO14497 2285 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 COL4A4P53420 1690 aaPredicted RBP2.49□□□□□ -2.01
XRN1-202ENST00000392981 A0A0D9SEW6 157 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 A0A1B0GVX0 72 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 Q6ZS92 163 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 ARID1BQ8NFD5 2236 aaPredicted RBP2.48□□□□□ -2.01
XRN1-202ENST00000392981 FGF12P61328 243 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 TACC2O95359 2948 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 GBF1Q92538 1859 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 KNL1Q8NG31 2342 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 PPYP01298 95 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 ACYP1P07311 99 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 EBI3Q14213 229 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 C7orf65Q6ZTY9 151 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 DOPEY2Q9Y3R5 2298 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 TDRD6O60522 2096 aaKnown RBP2.48□□□□□ -2.01
XRN1-202ENST00000392981 TRAV23DV6A0A075B6W5 121 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 TRAV1-1A0A0B4J248 108 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 MYMXA0A1B0GTQ4 84 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 TMEM254Q8TBM7 123 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 TM2D3Q9BRN9 247 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 FAM60AQ9NP50 221 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 TNFRSF19Q9NS68 423 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 H0YGG7 62 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 HCRTO43612 131 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 RNASE2P10153 161 aaKnown RBP2.48□□□□□ -2.01
XRN1-202ENST00000392981 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
XRN1-202ENST00000392981 KIF26AQ9ULI4 1882 aaPredicted RBP2.47□□□□□ -2.01
XRN1-202ENST00000392981 RPS27P42677 84 aaKnown RBP2.47□□□□□ -2.01
XRN1-202ENST00000392981 TMEM14EPQ6UXP3 125 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 OTOSQ8NHW6 89 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 PATE1Q8WXA2 126 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 TRGV2A0A075B6R0 118 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 C19orf71A6NCJ1 209 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 SYS1-DBNDD2H3BUS1 97 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 TFF1P04155 84 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 ARL14EPLP0DKL9 152 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 PRB3Q04118 309 aaPredicted RBP2.47□□□□□ -2.01
XRN1-202ENST00000392981 ESRGQ1W209 222 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 Q5XG85 94 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 CYP2G1PQ6ZSU1 146 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 C3orf22Q8N5N4 141 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 RTTNQ86VV8 2226 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 NLRC5Q86WI3 1866 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 SRRM5B3KS81 715 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 NDUFB1O75438 58 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 CASC2Q6XLA1 102 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 SMIM2Q9BVW6 85 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 MPC1Q9Y5U8 109 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 IGHV3-64A0A075B6Q5 118 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 FSTL3O95633 263 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 IGKV1-16P04430 117 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 SLC48A1Q6P1K1 146 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 AMELYQ99218 206 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 CEP290O15078 2479 aa2.47□□□□□ -2.01
XRN1-202ENST00000392981 IGLV3-10A0A075B6K4 115 aa2.46□□□□□ -2.01
XRN1-202ENST00000392981 H3BPC8 53 aa2.46□□□□□ -2.01
XRN1-202ENST00000392981 GCHFRP30047 84 aa2.46□□□□□ -2.01
XRN1-202ENST00000392981 SDIM1Q6ZPB5 146 aa2.46□□□□□ -2.01
XRN1-202ENST00000392981 CACNA1CQ13936 2221 aa2.46□□□□□ -2.01
XRN1-202ENST00000392981 SPAG17Q6Q759 2223 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 COL11A1P12107 1806 aaPredicted RBP2.46□□□□□ -2.02
XRN1-202ENST00000392981 C3orf84H3BNL1 204 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 PRB1P04280 392 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 MORN4Q8NDC4 146 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 TSKUQ8WUA8 353 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 C20orf78Q9BR46 151 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 IGLV4-69A0A075B6H9 119 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 NUPR1O60356 82 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 APELAP0DMC3 54 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 DEFB133Q30KQ1 61 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 FAM229BQ4G0N7 80 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 SCN2AQ99250 2005 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 CHCHD2Q9Y6H1 151 aaPredicted RBP2.46□□□□□ -2.02
XRN1-202ENST00000392981 TNRC6AQ8NDV7 1962 aaKnown RBP2.46□□□□□ -2.02
XRN1-202ENST00000392981 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 MAP1BP46821 2468 aaKnown RBP2.46□□□□□ -2.02
XRN1-202ENST00000392981 HIGD1CA8MV81 97 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 EPM2AB3EWF7 344 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 LINC01545Q5VT33 79 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 SLC50A1Q9BRV3 221 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 NUP214P35658 2090 aaPredicted RBP2.46□□□□□ -2.02
XRN1-202ENST00000392981 MIA3Q5JRA6 1907 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 AKAP13Q12802 2813 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 MAST2Q6P0Q8 1798 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 HTN3P15516 51 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 CRIP2P52943 208 aaPredicted RBP2.46□□□□□ -2.02
XRN1-202ENST00000392981 ELSPBP1Q96BH3 223 aa2.46□□□□□ -2.02
XRN1-202ENST00000392981 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 ABCA1O95477 2261 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 CCDC88CQ9P219 2028 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 HEATR1Q9H583 2144 aaKnown RBP2.45□□□□□ -2.02
XRN1-202ENST00000392981 SVILO95425 2214 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms