RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 F8WEM9 126 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 MBD6Q96DN6 1003 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 ARFGEF3Q5TH69 2177 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCN3B-202ENST00000392770 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 GAGE2EQ4V326 116 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 Q9HAA7 133 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 GAGE2DQ9UEU5 116 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 HERV-K104P63124 156 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 TIMM17AQ99595 171 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 CDK2AP2O75956 126 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 AMTNQ6UX39 209 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 IGLV2-11P01706 119 aa12.46□□□□□ -0.41
SCN3B-202ENST00000392770 NPSP0C0P6 89 aa12.46□□□□□ -0.41
SCN3B-202ENST00000392770 P0DMU3 169 aa12.45□□□□□ -0.42
SCN3B-202ENST00000392770 FAM231AP0DMU4 169 aa12.45□□□□□ -0.42
SCN3B-202ENST00000392770 FAM231CP0DMU5 169 aa12.45□□□□□ -0.42
SCN3B-202ENST00000392770 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
SCN3B-202ENST00000392770 A0A1W2PPR1 153 aa12.45□□□□□ -0.42
SCN3B-202ENST00000392770 AVPP01185 164 aa12.45□□□□□ -0.42
SCN3B-202ENST00000392770 IGLV1-40P01703 118 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 BDP1A6H8Y1 2624 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 F8W1H4 67 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 ODF1Q14990 250 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
SCN3B-202ENST00000392770 OCIAD2Q56VL3 154 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
SCN3B-202ENST00000392770 F8W735 103 aaPredicted RBP12.43□□□□□ -0.42
SCN3B-202ENST00000392770 Q6ZVH6 145 aa12.43□□□□□ -0.42
SCN3B-202ENST00000392770 HIST1H4AP62805 103 aaKnown RBP12.43□□□□□ -0.42
SCN3B-202ENST00000392770 COX7B2Q8TF08 81 aa12.43□□□□□ -0.42
SCN3B-202ENST00000392770 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
SCN3B-202ENST00000392770 C1orf43Q9BWL3 253 aa12.43□□□□□ -0.42
SCN3B-202ENST00000392770 KRTAP10-9P60411 292 aa12.43□□□□□ -0.42
SCN3B-202ENST00000392770 PTPRQQ9UMZ3 2332 aa12.43□□□□□ -0.42
SCN3B-202ENST00000392770 COX7A2LO14548 114 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 Q6ZTI0 123 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 TTTY13Q9BZ97 58 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 H3BMG7 143 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 RAI1Q7Z5J4 1906 aaPredicted RBP12.42□□□□□ -0.42
SCN3B-202ENST00000392770 C11orf86A6NJI1 115 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 CFC1BP0CG36 223 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 CFC1P0CG37 223 aa12.42□□□□□ -0.42
SCN3B-202ENST00000392770 MUSTN1Q8IVN3 82 aa12.41□□□□□ -0.42
SCN3B-202ENST00000392770 FAM208BQ5VWN6 2430 aa12.41□□□□□ -0.42
SCN3B-202ENST00000392770 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
SCN3B-202ENST00000392770 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
SCN3B-202ENST00000392770 TNRC6BQ9UPQ9 1833 aaKnown RBP12.4□□□□□ -0.42
SCN3B-202ENST00000392770 E9PLD3 99 aa12.4□□□□□ -0.42
SCN3B-202ENST00000392770 CARD19Q96LW7 228 aa12.4□□□□□ -0.42
SCN3B-202ENST00000392770 K7EP13 123 aa12.4□□□□□ -0.42
SCN3B-202ENST00000392770 CCL18P55774 89 aa12.4□□□□□ -0.42
SCN3B-202ENST00000392770 HCFC1P51610 2035 aa12.39□□□□□ -0.43
SCN3B-202ENST00000392770 SOCS3O14543 225 aa12.39□□□□□ -0.43
SCN3B-202ENST00000392770 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
SCN3B-202ENST00000392770 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
SCN3B-202ENST00000392770 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
SCN3B-202ENST00000392770 PPDPFLQ8WWR9 84 aa12.38□□□□□ -0.43
SCN3B-202ENST00000392770 ETDBQ3ZM63 59 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 CAMK2N2Q96S95 79 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 RPL18AQ02543 176 aaKnown RBP12.37□□□□□ -0.43
SCN3B-202ENST00000392770 Q6ZUT4 128 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 DAND5Q8N907 189 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 PRR9Q5T870 116 aa12.37□□□□□ -0.43
SCN3B-202ENST00000392770 HIGD1BQ9P298 99 aa12.36□□□□□ -0.43
SCN3B-202ENST00000392770 IGLL5B9A064 214 aa12.36□□□□□ -0.43
SCN3B-202ENST00000392770 IFITM1P13164 125 aa12.36□□□□□ -0.43
SCN3B-202ENST00000392770 U3KQK5 164 aa12.36□□□□□ -0.43
SCN3B-202ENST00000392770 A4D1N5 150 aa12.35□□□□□ -0.43
SCN3B-202ENST00000392770 FXYD2P54710 66 aa12.35□□□□□ -0.43
SCN3B-202ENST00000392770 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
SCN3B-202ENST00000392770 LINC00482Q8N8I6 264 aa12.34□□□□□ -0.43
SCN3B-202ENST00000392770 HILS1P60008 231 aa12.34□□□□□ -0.43
SCN3B-202ENST00000392770 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
SCN3B-202ENST00000392770 CCL25O15444 150 aa12.34□□□□□ -0.43
SCN3B-202ENST00000392770 IGHV1-58A0A0C4DH39 117 aa12.33□□□□□ -0.43
SCN3B-202ENST00000392770 SPATA12Q7Z6I5 190 aa12.33□□□□□ -0.43
SCN3B-202ENST00000392770 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.43
SCN3B-202ENST00000392770 FAM222AQ5U5X8 452 aa12.33□□□□□ -0.44
SCN3B-202ENST00000392770 CUL9Q8IWT3 2517 aa12.33□□□□□ -0.44
SCN3B-202ENST00000392770 EDN2P20800 178 aa12.33□□□□□ -0.44
SCN3B-202ENST00000392770 C11orf21Q9P2W6 132 aa12.33□□□□□ -0.44
SCN3B-202ENST00000392770 SMIM9A6NGZ8 99 aa12.32□□□□□ -0.44
SCN3B-202ENST00000392770 KLK12Q9UKR0 248 aa12.32□□□□□ -0.44
SCN3B-202ENST00000392770 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
SCN3B-202ENST00000392770 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
SCN3B-202ENST00000392770 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
SCN3B-202ENST00000392770 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
SCN3B-202ENST00000392770 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
SCN3B-202ENST00000392770 LYRM9A8MSI8 78 aa12.31□□□□□ -0.44
SCN3B-202ENST00000392770 PROK1P58294 105 aa12.31□□□□□ -0.44
SCN3B-202ENST00000392770 M0QY20 66 aa12.31□□□□□ -0.44
SCN3B-202ENST00000392770 MRPS12O15235 138 aaKnown RBP12.31□□□□□ -0.44
SCN3B-202ENST00000392770 SMR3AQ99954 134 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms