RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 IGKV2-29A2NJV5 120 aaPredicted RBP0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 NAP1L6A6NFF2 107 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 KRTDAPP60985 99 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 UBA52P62987 128 aaKnown RBP0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 SSBP1Q04837 148 aaKnown RBP0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 ZNF56Q15929 161 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 FAM74A4Q5TZK3 123 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 Q6ZQY7 126 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 C20orf197Q8N268 126 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 C5orf56Q8N8D9 126 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 BET1LQ9NYM9 111 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 LINC00312Q9Y6C7 94 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 V9GYS6 101 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 FREM1Q5H8C1 2179 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 CLPSL1A2RUU4 121 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 J3QKU1 62 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 CHD1O14646 1710 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 ABCC5O15440 1437 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 SNCAP37840 140 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 CAV3P56539 151 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 ELOF1P60002 83 aaKnown RBP0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 KLKP1Q107X0 134 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 C10orf128Q5T292 105 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 C10orf99Q6UWK7 81 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 LINC00575Q6W349 94 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 KRTAP13-1Q8IUC0 172 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 COX7B2Q8TF08 81 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 CCL19Q99731 98 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 VAMP8Q9BV40 100 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 Q9H521 79 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 BAZ1AQ9NRL2 1556 aaPredicted RBP0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 LINC00474Q9P2X8 69 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 TET3O43151 1660 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 UNC13CQ8NB66 2214 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 NINQ8N4C6 2090 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 MYO18AQ92614 2054 aaKnown RBP0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 MYOFQ9NZM1 2061 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 MYH8P13535 1937 aa0.68□□□□□ -2.3
TRAJ39-201ENST00000390498 PLXNA1Q9UIW2 1896 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 KIAA1551Q9HCM1 1747 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 LAMC3Q9Y6N6 1575 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 CASP8AP2Q9UKL3 1982 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 AFDNP55196 1824 aaKnown RBP0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 PARP14Q460N5 1801 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 PHIPQ8WWQ0 1821 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 TRBV7-3A0A075B6L6 115 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 FXYD1O00168 92 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 GNGT2O14610 69 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 NCR3O14931 201 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 MT-ATP8P03928 68 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 GNG11P61952 73 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 Q0VG73 95 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 FAM167A-AS1Q96KT0 104 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 LINC00208Q96KT6 92 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 MGST2Q99735 147 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 SCP2D1Q9UJQ7 156 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 LENEPQ9Y5L5 61 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 V9GYV3 84 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 PRDM15P57071 1507 aaPredicted RBP0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 CHD3Q12873 2000 aaKnown RBP0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 DOCK1Q14185 1865 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 PCNX2A6NKB5 2137 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 GOLGA3Q08378 1498 aa0.67□□□□□ -2.3
TRAJ39-201ENST00000390498 CITO14578 2027 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 SIPA1L3O60292 1781 aaPredicted RBP0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 ABCC3O15438 1527 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 A0A087WTM6 91 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 CRYM-AS1A6NIL9 109 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 ATOX1O00244 68 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 NDUFC1O43677 76 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 ASIPP42127 132 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 EFNA4P52798 201 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 EDDM3BP56851 147 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 C6orf52Q5T4I8 152 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 KRTAP5-11Q6L8G4 156 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 Q86TA4 180 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 C9orf62Q8N4C0 152 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 TSLPQ969D9 159 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 PMCHL2Q9BQD1 86 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 TMEM14BQ9NUH8 114 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 UQCR10Q9UDW1 63 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 ANKRD36BQ8N2N9 1353 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 MARF1Q9Y4F3 1742 aaKnown RBP0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 SHANK2Q9UPX8 1470 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 DOCK2Q92608 1830 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 DIP2CQ9Y2E4 1556 aa0.66□□□□□ -2.3
TRAJ39-201ENST00000390498 MYOM1P52179 1685 aa0.65□□□□□ -2.3
TRAJ39-201ENST00000390498 ZGRF1Q86YA3 2104 aa0.65□□□□□ -2.3
TRAJ39-201ENST00000390498 ARHGEF12Q9NZN5 1544 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 INTS1Q8N201 2190 aaKnown RBP0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 PRDM2Q13029 1718 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 LOC285095A0A1B0GVY8 99 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 A0A1W2PPM0 123 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 hADV29S1A0JD25 119 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 PPP1R17O96001 155 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 COX6CP09669 75 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 IGLC1P0CG04 106 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms