RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 C18orf65Q6ZTR6 163 aa11.01□□□□□ -0.65
SCFD2-201ENST00000388940 Q96MF0 132 aa11.01□□□□□ -0.65
SCFD2-201ENST00000388940 HIST1H4GQ99525 98 aa11.01□□□□□ -0.65
SCFD2-201ENST00000388940 GEMIN7Q9H840 131 aaKnown RBP11.01□□□□□ -0.65
SCFD2-201ENST00000388940 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
SCFD2-201ENST00000388940 UBR5O95071 2799 aaPredicted RBP11.01□□□□□ -0.65
SCFD2-201ENST00000388940 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
SCFD2-201ENST00000388940 TSSC4Q9Y5U2 329 aaPredicted RBP11.01□□□□□ -0.65
SCFD2-201ENST00000388940 H3BMM0 161 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 DEFB131AP59861 70 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 TMEM86BQ8N661 226 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 ZNF462Q96JM2 2506 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 C11orf86A6NJI1 115 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 KNCNA6PVL3 124 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
SCFD2-201ENST00000388940 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
SCFD2-201ENST00000388940 DEFB136Q30KP8 78 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 KRTAP1-3Q8IUG1 177 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
SCFD2-201ENST00000388940 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
SCFD2-201ENST00000388940 K7ERJ3 54 aa10.99□□□□□ -0.65
SCFD2-201ENST00000388940 HERVK_113P61574 105 aa10.99□□□□□ -0.65
SCFD2-201ENST00000388940 C12orf74Q32Q52 190 aa10.99□□□□□ -0.65
SCFD2-201ENST00000388940 PIK3CD-AS1Q5SR53 167 aa10.99□□□□□ -0.65
SCFD2-201ENST00000388940 SPAG8Q99932 426 aaPredicted RBP10.99□□□□□ -0.65
SCFD2-201ENST00000388940 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
SCFD2-201ENST00000388940 IGLL5B9A064 214 aa10.98□□□□□ -0.65
SCFD2-201ENST00000388940 I3L3M4 83 aa10.98□□□□□ -0.65
SCFD2-201ENST00000388940 PTH2Q96A98 100 aa10.98□□□□□ -0.65
SCFD2-201ENST00000388940 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
SCFD2-201ENST00000388940 SORL1Q92673 2214 aa10.98□□□□□ -0.65
SCFD2-201ENST00000388940 ZNF815PA8K554 130 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 P0DMU3 169 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 FAM231AP0DMU4 169 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 FAM231CP0DMU5 169 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 TMEM61Q8N0U2 210 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 TEX29Q8N6K0 151 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 ZANQ9Y493 2812 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
SCFD2-201ENST00000388940 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
SCFD2-201ENST00000388940 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
SCFD2-201ENST00000388940 C20orf203Q8NBC4 194 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 POLQO75417 2590 aa10.97□□□□□ -0.65
SCFD2-201ENST00000388940 NFE4Q86UQ8 179 aa10.96□□□□□ -0.65
SCFD2-201ENST00000388940 DLX4Q92988 240 aaPredicted RBP10.96□□□□□ -0.65
SCFD2-201ENST00000388940 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.65
SCFD2-201ENST00000388940 DEFB104AQ8WTQ1 72 aa10.96□□□□□ -0.66
SCFD2-201ENST00000388940 F8W1H4 67 aa10.95□□□□□ -0.66
SCFD2-201ENST00000388940 DEFB114Q30KQ6 69 aa10.95□□□□□ -0.66
SCFD2-201ENST00000388940 ZNRF2Q8NHG8 242 aa10.95□□□□□ -0.66
SCFD2-201ENST00000388940 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
SCFD2-201ENST00000388940 MXRA5Q9NR99 2828 aa10.95□□□□□ -0.66
SCFD2-201ENST00000388940 CSMD2Q7Z408 3487 aa10.95□□□□□ -0.66
SCFD2-201ENST00000388940 A8MWV9 139 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 M0R2P5 195 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 EPG5Q9HCE0 2579 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 LRRK2Q5S007 2527 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 DYNLRB2Q8TF09 96 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 ZNF418Q8TF45 676 aaPredicted RBP10.94□□□□□ -0.66
SCFD2-201ENST00000388940 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
SCFD2-201ENST00000388940 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
SCFD2-201ENST00000388940 EMP1P54849 157 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 SCGB1D4Q6XE38 83 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 Q6ZSV7 163 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 KLHL30-AS1Q8NEE0 82 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 DUX3Q96PT4 197 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 RRN3P1Q2M238 152 aa10.93□□□□□ -0.66
SCFD2-201ENST00000388940 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
SCFD2-201ENST00000388940 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
SCFD2-201ENST00000388940 A0A0J9YY99 117 aa10.92□□□□□ -0.66
SCFD2-201ENST00000388940 KHDC1LQ5JSQ8 128 aa10.92□□□□□ -0.66
SCFD2-201ENST00000388940 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
SCFD2-201ENST00000388940 HTN1P15515 57 aa10.91□□□□□ -0.66
SCFD2-201ENST00000388940 RAX2Q96IS3 184 aa10.91□□□□□ -0.66
SCFD2-201ENST00000388940 NACAE9PAV3 2078 aa10.91□□□□□ -0.66
SCFD2-201ENST00000388940 TEX15Q9BXT5 2789 aa10.91□□□□□ -0.66
SCFD2-201ENST00000388940 NAV2Q8IVL1 2488 aa10.91□□□□□ -0.66
SCFD2-201ENST00000388940 IGLV4-3A0A075B6K6 122 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 SRSF9Q13242 221 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCFD2-201ENST00000388940 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
SCFD2-201ENST00000388940 SPXQ9BT56 116 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 UBE2D1P51668 147 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 FAM110AQ9BQ89 295 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 CREBBPQ92793 2442 aa10.9□□□□□ -0.66
SCFD2-201ENST00000388940 J3QQQ9 107 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 LEPROTO15243 131 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 TSPEAR-AS2P59090 65 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 BEAN1Q3B7T3 259 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 SHISA2Q6UWI4 295 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 AMELXQ99217 191 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 VCX2Q9H322 139 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 TNFRSF18Q9Y5U5 241 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 RHODO00212 210 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 INSP01308 110 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 851.2 ms