RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 M0R1W7 72 aa11.33□□□□□ -0.59
VLDLR-202ENST00000382099 GATA4P43694 442 aa11.33□□□□□ -0.59
VLDLR-202ENST00000382099 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.59
VLDLR-202ENST00000382099 A0A087WVE0 104 aa11.33□□□□□ -0.6
VLDLR-202ENST00000382099 DAZ2Q13117 558 aaKnown RBP11.33□□□□□ -0.6
VLDLR-202ENST00000382099 DAZ4Q86SG3 579 aaKnown RBP11.33□□□□□ -0.6
VLDLR-202ENST00000382099 DAZ1Q9NQZ3 744 aaKnown RBP11.33□□□□□ -0.6
VLDLR-202ENST00000382099 DAZ3Q9NR90 486 aaKnown RBP11.33□□□□□ -0.6
VLDLR-202ENST00000382099 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
VLDLR-202ENST00000382099 DAND5Q8N907 189 aa11.33□□□□□ -0.6
VLDLR-202ENST00000382099 EDN2P20800 178 aa11.32□□□□□ -0.6
VLDLR-202ENST00000382099 LINC00336Q6ZUF6 198 aa11.32□□□□□ -0.6
VLDLR-202ENST00000382099 CELSR1Q9NYQ6 3014 aa11.32□□□□□ -0.6
VLDLR-202ENST00000382099 NDUFB3O43676 98 aa11.32□□□□□ -0.6
VLDLR-202ENST00000382099 CCL17Q92583 94 aa11.32□□□□□ -0.6
VLDLR-202ENST00000382099 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
VLDLR-202ENST00000382099 IGHV1-46P01743 117 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 NDPQ00604 133 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
VLDLR-202ENST00000382099 CENPEQ02224 2701 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 IGIPA6NJ69 53 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 PRO0628Q9UI54 55 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 MALP21145 153 aa11.31□□□□□ -0.6
VLDLR-202ENST00000382099 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 WFDC11Q8NEX6 87 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 MBD3L2Q8NHZ7 208 aaPredicted RBP11.3□□□□□ -0.6
VLDLR-202ENST00000382099 LINC01600Q96MT4 127 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 F8WDY8 70 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 C5orf38Q86SI9 138 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 SERP2Q8N6R1 65 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 A0A0U1RQV1 116 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 LOXP28300 417 aaPredicted RBP11.3□□□□□ -0.6
VLDLR-202ENST00000382099 CXCL5P42830 114 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 CIRBPQ14011 172 aaKnown RBP11.3□□□□□ -0.6
VLDLR-202ENST00000382099 LYPD2Q6UXB3 125 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 TMEM141Q96I45 108 aa11.3□□□□□ -0.6
VLDLR-202ENST00000382099 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
VLDLR-202ENST00000382099 ADAMTSL4-AS1Q5T5F5 129 aa11.29□□□□□ -0.6
VLDLR-202ENST00000382099 PSMG3-AS1Q96PY0 264 aa11.29□□□□□ -0.6
VLDLR-202ENST00000382099 PRO3102Q9H379 93 aa11.29□□□□□ -0.6
VLDLR-202ENST00000382099 BAALC-AS2P0C853 105 aa11.29□□□□□ -0.6
VLDLR-202ENST00000382099 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 IGF1P05019 195 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 TIRAPP58753 221 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 A0A087WWL8 130 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 IGHG3P01860 377 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 SEC61GP60059 68 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 RAI1Q7Z5J4 1906 aaPredicted RBP11.28□□□□□ -0.6
VLDLR-202ENST00000382099 PRRC2AP48634 2157 aaKnown RBP11.28□□□□□ -0.6
VLDLR-202ENST00000382099 NXPH4O95158 308 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 HIST1H4AP62805 103 aaKnown RBP11.28□□□□□ -0.6
VLDLR-202ENST00000382099 PRSS33Q8NF86 280 aa11.28□□□□□ -0.6
VLDLR-202ENST00000382099 C22orf34Q6ZV56 151 aa11.27□□□□□ -0.61
VLDLR-202ENST00000382099 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 A8MZ25 164 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 PTPRQQ9UMZ3 2332 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 DNAL4O96015 105 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 FAM236DA0A1B0GTK5 79 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 VCYO14598 125 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 PPP1R17O96001 155 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 FAM236CP0DP71 79 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 PRR9Q5T870 116 aa11.26□□□□□ -0.61
VLDLR-202ENST00000382099 ANKHD1Q8IWZ3 2542 aaKnown RBP11.26□□□□□ -0.61
VLDLR-202ENST00000382099 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
VLDLR-202ENST00000382099 GNRH2O43555 120 aa11.25□□□□□ -0.61
VLDLR-202ENST00000382099 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
VLDLR-202ENST00000382099 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
VLDLR-202ENST00000382099 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
VLDLR-202ENST00000382099 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
VLDLR-202ENST00000382099 TMEM61Q8N0U2 210 aa11.24□□□□□ -0.61
VLDLR-202ENST00000382099 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
VLDLR-202ENST00000382099 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
VLDLR-202ENST00000382099 TMEM243Q9BU79 118 aa11.24□□□□□ -0.61
VLDLR-202ENST00000382099 DEFB1P60022 68 aa11.23□□□□□ -0.61
VLDLR-202ENST00000382099 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.23□□□□□ -0.61
VLDLR-202ENST00000382099 NUP37Q8NFH4 326 aa11.23□□□□□ -0.61
VLDLR-202ENST00000382099 V9GYY9 64 aa11.23□□□□□ -0.61
VLDLR-202ENST00000382099 FAM27E3Q08E93 113 aa11.22□□□□□ -0.61
VLDLR-202ENST00000382099 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
VLDLR-202ENST00000382099 Q9HAA7 133 aa11.22□□□□□ -0.61
VLDLR-202ENST00000382099 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
VLDLR-202ENST00000382099 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
VLDLR-202ENST00000382099 FHL2Q14192 279 aa11.22□□□□□ -0.61
VLDLR-202ENST00000382099 SLC25A15Q9Y619 301 aa11.22□□□□□ -0.61
VLDLR-202ENST00000382099 MIAQ16674 131 aa11.21□□□□□ -0.61
VLDLR-202ENST00000382099 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
VLDLR-202ENST00000382099 FANCD2OSQ96PS1 177 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms