RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 LINC00269Q8N2A0 174 aa3.06□□□□□ -1.92
C9orf72-203ENST00000380003 NTN5Q8WTR8 489 aaPredicted RBP3.06□□□□□ -1.92
C9orf72-203ENST00000380003 RNASE7Q9H1E1 156 aaKnown RBP3.06□□□□□ -1.92
C9orf72-203ENST00000380003 GAS8-AS1O95177 125 aa3.06□□□□□ -1.92
C9orf72-203ENST00000380003 SFRP2Q96HF1 295 aa3.06□□□□□ -1.92
C9orf72-203ENST00000380003 ZFP30Q9Y2G7 519 aa3.06□□□□□ -1.92
C9orf72-203ENST00000380003 BCL2L11O43521 198 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 ALKAL2Q6UX46 152 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 SYT8Q8NBV8 401 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 OR2D3Q8NGH3 330 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 MLST8Q9BVC4 326 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 GFRA4Q9GZZ7 299 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 TRBV6-8A0A0A6YYG3 113 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 A0A1B0GVG6 124 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 LINC00694P0DN24 101 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 UBE2D3P61077 147 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 UBE2D2P62837 147 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 RPL36AP83881 106 aaKnown RBP3.05□□□□□ -1.92
C9orf72-203ENST00000380003 ZFP82Q8N141 532 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 CIRBP-AS1Q8TBR5 109 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 RPL36ALQ969Q0 106 aaKnown RBP3.05□□□□□ -1.92
C9orf72-203ENST00000380003 LINC00526Q96FQ7 95 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 LRP2P98164 4655 aa3.05□□□□□ -1.92
C9orf72-203ENST00000380003 IGLV4-60A0A075B6I1 120 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 FAM229AH3BQW9 127 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 SEC11BP0C7V7 166 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 NTF3P20783 257 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 MED9Q9NWA0 146 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 TRAV8-3A0A0A6YYJ7 113 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 LYZL1Q6UWQ5 148 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 USP17L23D6RBM5 183 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 HNRNPA3P51991 378 aaKnown RBP3.04□□□□□ -1.92
C9orf72-203ENST00000380003 SUMO4Q6EEV6 95 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 CDPF1Q6NVV7 123 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 ATRAIDQ6UW56 229 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 SH2D6Q7Z4S9 175 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 ARL6IP6Q8N6S5 226 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 MBD3L1Q8WWY6 194 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 RPL39LQ96EH5 51 aaKnown RBP3.04□□□□□ -1.92
C9orf72-203ENST00000380003 DPH3Q96FX2 82 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 C1orf43Q9BWL3 253 aa3.04□□□□□ -1.92
C9orf72-203ENST00000380003 NKX6-2Q9C056 277 aaPredicted RBP3.04□□□□□ -1.92
C9orf72-203ENST00000380003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.04□□□□□ -1.92
C9orf72-203ENST00000380003 K7EN84 100 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 CRPP02741 224 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 SMIM17P0DL12 118 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 GNG4P50150 75 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 RBX1P62877 108 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 ZNF345Q14585 488 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 DAZAP1Q96EP5 407 aaKnown RBP3.03□□□□□ -1.92
C9orf72-203ENST00000380003 KIF25-AS1Q9Y6Z4 181 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 PKHD1L1Q86WI1 4243 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 HMSDA8MTL9 139 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 M0QY20 66 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 PRSS1P07477 247 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 MEF2BQ02080 365 aaPredicted RBP3.03□□□□□ -1.92
C9orf72-203ENST00000380003 TWIST1Q15672 202 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 FER1L6-AS1Q8NA97 138 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 OCC1Q8TAD7 63 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 MUC2Q02817 5179 aa3.03□□□□□ -1.92
C9orf72-203ENST00000380003 A0A0D9SG52 128 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 TRBV6-1A0A0K0K1D8 114 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 UMAD1C9J7I0 102 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 RHODO00212 210 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 P01737 135 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 SLPIP03973 132 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 KCNIP4Q6PIL6 250 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 NUDT10Q8NFP7 164 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 GTSF1Q8WW33 167 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 NUDT11Q96G61 164 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.02□□□□□ -1.93
C9orf72-203ENST00000380003 A0A087WWC5 75 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 IGKV2-29A2NJV5 120 aaPredicted RBP3.02□□□□□ -1.93
C9orf72-203ENST00000380003 LAGE3Q14657 143 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 HIGD2BQ4VC39 106 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 RNASE13Q5GAN3 156 aaKnown RBP3.02□□□□□ -1.93
C9orf72-203ENST00000380003 CHAC1Q9BUX1 264 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 SSBP4Q9BWG4 385 aaPredicted RBP3.02□□□□□ -1.93
C9orf72-203ENST00000380003 TM2D2Q9BX73 214 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 hDV102S1A0JD36 115 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 IFNA1P01562 189 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 TIRAPP58753 221 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 RAB4BP61018 213 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 REG3AQ06141 175 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 COX8CQ7Z4L0 72 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 PGLYRP4Q96LB8 373 aa3.02□□□□□ -1.93
C9orf72-203ENST00000380003 IGKV2-24A0A0C4DH68 120 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 SNAI2O43623 268 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 OR5AL1P0C617 328 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 Q6ZNX1 250 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 C20orf203Q8NBC4 194 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 LYPD6BQ8NI32 183 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 AP1S3Q96PC3 154 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 TRBV25-1A0A075B6N4 114 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 C19orf71A6NCJ1 209 aa3.01□□□□□ -1.93
C9orf72-203ENST00000380003 SMKR1H3BMG3 65 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms