RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
HIPK3-202ENST00000379016 C1orf195Q5TG92 126 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 MARF1Q9Y4F3 1742 aaKnown RBP10.29□□□□□ -0.76
HIPK3-202ENST00000379016 PDE6GP18545 87 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 LHFPL1Q86WI0 220 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 IGKV2-28A0A075B6P5 120 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 K7ENP7 123 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 IGKV2D-28P01615 120 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 CIRBP-AS1Q8TBR5 109 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
HIPK3-202ENST00000379016 AGPAT4-IT1Q9H0P7 198 aa10.28□□□□□ -0.76
HIPK3-202ENST00000379016 C17orf58Q2M2W7 97 aa10.28□□□□□ -0.76
HIPK3-202ENST00000379016 BRCA1P38398 1863 aaKnown RBP10.28□□□□□ -0.76
HIPK3-202ENST00000379016 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
HIPK3-202ENST00000379016 PMAIP1Q13794 54 aa10.28□□□□□ -0.76
HIPK3-202ENST00000379016 TIMM17BO60830 172 aa10.27□□□□□ -0.76
HIPK3-202ENST00000379016 IGLV3-32A0A0A0MS00 114 aa10.27□□□□□ -0.77
HIPK3-202ENST00000379016 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
HIPK3-202ENST00000379016 AJUBAQ96IF1 538 aa10.27□□□□□ -0.77
HIPK3-202ENST00000379016 WT1-ASQ06250 92 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 NBASA2RRP1 2371 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 DEFB131BA0A096LNP1 70 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 K7EM74 188 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 HILS1P60008 231 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 TMEM89A2RUT3 159 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 A6NDX4 124 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 BLCAPP62952 87 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 VWA8A3KMH1 1905 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 IGLC6P0CF74 106 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 Q6ZS92 163 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 PTH2Q96A98 100 aa10.26□□□□□ -0.77
HIPK3-202ENST00000379016 GRNP28799 593 aaKnown RBP10.25□□□□□ -0.77
HIPK3-202ENST00000379016 ODF1Q14990 250 aa10.25□□□□□ -0.77
HIPK3-202ENST00000379016 ZNF747Q9BV97 191 aa10.25□□□□□ -0.77
HIPK3-202ENST00000379016 TECTAO75443 2155 aa10.25□□□□□ -0.77
HIPK3-202ENST00000379016 CCKP06307 115 aa10.25□□□□□ -0.77
HIPK3-202ENST00000379016 REG3AQ06141 175 aa10.25□□□□□ -0.77
HIPK3-202ENST00000379016 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
HIPK3-202ENST00000379016 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
HIPK3-202ENST00000379016 ARID2Q68CP9 1835 aa10.24□□□□□ -0.77
HIPK3-202ENST00000379016 COL4A5P29400 1685 aa10.24□□□□□ -0.77
HIPK3-202ENST00000379016 RPL37AP8A6NKH3 93 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
HIPK3-202ENST00000379016 TRBV6-6A0A0A6YYG2 114 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 H3BUA1 57 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 IGHV2-5P01817 119 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 FXYD2P54710 66 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 P0DMU3 169 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 FAM231AP0DMU4 169 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 FAM231CP0DMU5 169 aa10.23□□□□□ -0.77
HIPK3-202ENST00000379016 PRO0255Q9UI72 69 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 OTOGLQ3ZCN5 2332 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 EXPH5Q8NEV8 1989 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 K7EN84 100 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 SCN10AQ9Y5Y9 1956 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 LINC00643Q86TS7 51 aa10.22□□□□□ -0.77
HIPK3-202ENST00000379016 DNAJC9-AS1A6NH13 148 aa10.21□□□□□ -0.77
HIPK3-202ENST00000379016 DEFB1P60022 68 aa10.21□□□□□ -0.77
HIPK3-202ENST00000379016 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.77
HIPK3-202ENST00000379016 ADCYAP1P18509 176 aa10.21□□□□□ -0.77
HIPK3-202ENST00000379016 SPATA12Q7Z6I5 190 aa10.21□□□□□ -0.77
HIPK3-202ENST00000379016 ATG2AQ2TAZ0 1938 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 TRPM3Q9HCF6 1732 aaPredicted RBP10.21□□□□□ -0.78
HIPK3-202ENST00000379016 ZNF706Q9Y5V0 76 aaPredicted RBP10.21□□□□□ -0.78
HIPK3-202ENST00000379016 SPG11Q96JI7 2443 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 FRMPD3Q5JV73 1810 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 H3BT86 120 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 IGF1P05019 195 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 ESRGQ1W209 222 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 WFDC10AQ9H1F0 79 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 TCL1BO95988 128 aa10.21□□□□□ -0.78
HIPK3-202ENST00000379016 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
HIPK3-202ENST00000379016 FLVCR1-AS1Q8TAF5 88 aa10.2□□□□□ -0.78
HIPK3-202ENST00000379016 C22orf34Q6ZV56 151 aa10.2□□□□□ -0.78
HIPK3-202ENST00000379016 Q6Q795 121 aa10.19□□□□□ -0.78
HIPK3-202ENST00000379016 ADAMTS9Q9P2N4 1935 aa10.19□□□□□ -0.78
HIPK3-202ENST00000379016 TTTY13Q9BZ97 58 aa10.19□□□□□ -0.78
HIPK3-202ENST00000379016 MDFICQ9P1T7 246 aa10.19□□□□□ -0.78
HIPK3-202ENST00000379016 MIFP14174 115 aa10.19□□□□□ -0.78
HIPK3-202ENST00000379016 ZNF726P1Q15940 193 aa10.19□□□□□ -0.78
HIPK3-202ENST00000379016 CHCHD10Q8WYQ3 142 aaPredicted RBP10.19□□□□□ -0.78
HIPK3-202ENST00000379016 CSPG4Q6UVK1 2322 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 CREBBPQ92793 2442 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 J3QRE1 110 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 FAM19A3Q7Z5A8 133 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 PLAC8L1A1L4L8 177 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 UQCRQO14949 82 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 TOMM6Q96B49 74 aa10.18□□□□□ -0.78
HIPK3-202ENST00000379016 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
HIPK3-202ENST00000379016 LCTP09848 1927 aa10.17□□□□□ -0.78
HIPK3-202ENST00000379016 ZFAND2AQ8N6M9 145 aa10.17□□□□□ -0.78
HIPK3-202ENST00000379016 IGLV3-19P01714 112 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms