RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
TMEM88B-201ENST00000378821 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
TMEM88B-201ENST00000378821 F5H697 171 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 MGPP08493 103 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 NTF3P20783 257 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 RPL23P62829 140 aaKnown RBP12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 TMEM241Q24JQ0 296 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 CT83Q5H943 113 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 WDR73Q6P4I2 378 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 NEXN-AS1Q8NBZ9 246 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 OR10G8Q8NGN5 311 aa12.69□□□□□ -0.38
TMEM88B-201ENST00000378821 TRAV8-6A0A0B4J262 113 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 A8MWL6 223 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 TRGC1P0CF51 173 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 FUSP35637 526 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 XGP55808 180 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 UBE2D3P61077 147 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 RAB14P61106 215 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 UBE2D2P62837 147 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 RPL36AP83881 106 aaKnown RBP12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 RPL36ALQ969Q0 106 aaKnown RBP12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 ISOC2Q96AB3 205 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 OSTCQ9NRP0 149 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 NAT8Q9UHE5 227 aa12.68□□□□□ -0.38
TMEM88B-201ENST00000378821 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
TMEM88B-201ENST00000378821 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
TMEM88B-201ENST00000378821 IFITM2Q01629 132 aa12.67□□□□□ -0.38
TMEM88B-201ENST00000378821 ADIRFQ15847 76 aa12.67□□□□□ -0.38
TMEM88B-201ENST00000378821 TWIST1Q15672 202 aa12.66□□□□□ -0.38
TMEM88B-201ENST00000378821 SUMO4Q6EEV6 95 aa12.66□□□□□ -0.38
TMEM88B-201ENST00000378821 PGLYRP4Q96LB8 373 aa12.66□□□□□ -0.38
TMEM88B-201ENST00000378821 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
TMEM88B-201ENST00000378821 KRTAP10-1P60331 282 aa12.65□□□□□ -0.38
TMEM88B-201ENST00000378821 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
TMEM88B-201ENST00000378821 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
TMEM88B-201ENST00000378821 V9GYV3 84 aa12.65□□□□□ -0.38
TMEM88B-201ENST00000378821 FOXA3P55318 350 aaPredicted RBP12.64□□□□□ -0.39
TMEM88B-201ENST00000378821 LAGE3Q14657 143 aa12.64□□□□□ -0.39
TMEM88B-201ENST00000378821 C15orf54Q8N8G6 183 aa12.64□□□□□ -0.39
TMEM88B-201ENST00000378821 A0A087WWC5 75 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 M0QY20 66 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 IGHV3-30P01768 117 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 IGHV3-33P01772 117 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 IGHV3-30-3P0DP02 117 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 IGHV3-30-5P0DP03 117 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 Q8N3U1 123 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
TMEM88B-201ENST00000378821 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
TMEM88B-201ENST00000378821 H7C1H1 209 aa12.61□□□□□ -0.39
TMEM88B-201ENST00000378821 GCSHP23434 173 aa12.61□□□□□ -0.39
TMEM88B-201ENST00000378821 NTN5Q8WTR8 489 aaPredicted RBP12.61□□□□□ -0.39
TMEM88B-201ENST00000378821 FAM231BA6NCW3 169 aa12.6□□□□□ -0.39
TMEM88B-201ENST00000378821 PSCAO43653 123 aa12.59□□□□□ -0.39
TMEM88B-201ENST00000378821 RASL11AQ6T310 242 aa12.59□□□□□ -0.39
TMEM88B-201ENST00000378821 BORCS7Q96B45 105 aa12.59□□□□□ -0.39
TMEM88B-201ENST00000378821 DNAJC30Q96LL9 226 aa12.59□□□□□ -0.39
TMEM88B-201ENST00000378821 TRAV26-2A0A0B4J265 109 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 EPM2AB3EWF7 344 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 NIT1Q86X76 327 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 Q8N814 137 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 NUP35Q8NFH5 326 aa12.58□□□□□ -0.4
TMEM88B-201ENST00000378821 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
TMEM88B-201ENST00000378821 DAZ4Q86SG3 579 aaKnown RBP12.57□□□□□ -0.4
TMEM88B-201ENST00000378821 GATD1Q8NB37 220 aa12.57□□□□□ -0.4
TMEM88B-201ENST00000378821 DAZ3Q9NR90 486 aaKnown RBP12.57□□□□□ -0.4
TMEM88B-201ENST00000378821 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
TMEM88B-201ENST00000378821 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.56□□□□□ -0.4
TMEM88B-201ENST00000378821 Q9HAA7 133 aa12.56□□□□□ -0.4
TMEM88B-201ENST00000378821 NIT2Q9NQR4 276 aa12.56□□□□□ -0.4
TMEM88B-201ENST00000378821 SMIM27A0A1W2PRY6 76 aa12.55□□□□□ -0.4
TMEM88B-201ENST00000378821 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
TMEM88B-201ENST00000378821 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
TMEM88B-201ENST00000378821 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
TMEM88B-201ENST00000378821 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
TMEM88B-201ENST00000378821 TRAV8-3A0A0A6YYJ7 113 aa12.54□□□□□ -0.4
TMEM88B-201ENST00000378821 RPL39LQ96EH5 51 aaKnown RBP12.54□□□□□ -0.4
TMEM88B-201ENST00000378821 URGCP-MRPS24S4R325 110 aa12.54□□□□□ -0.4
TMEM88B-201ENST00000378821 RIGQ13278 110 aa12.53□□□□□ -0.4
TMEM88B-201ENST00000378821 TMEM97Q5BJF2 176 aa12.53□□□□□ -0.4
TMEM88B-201ENST00000378821 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
TMEM88B-201ENST00000378821 FRZBQ92765 325 aa12.52□□□□□ -0.41
TMEM88B-201ENST00000378821 RNF185Q96GF1 192 aa12.52□□□□□ -0.41
TMEM88B-201ENST00000378821 CHCHD7Q9BUK0 85 aa12.52□□□□□ -0.41
TMEM88B-201ENST00000378821 FAT1Q14517 4588 aa12.51□□□□□ -0.41
TMEM88B-201ENST00000378821 A0A087WX48 190 aa12.51□□□□□ -0.41
TMEM88B-201ENST00000378821 Q5VSD8 79 aa12.51□□□□□ -0.41
TMEM88B-201ENST00000378821 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
TMEM88B-201ENST00000378821 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 GAS8-AS1O95177 125 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 WFDC2Q14508 124 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 MPV17L2Q567V2 206 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
TMEM88B-201ENST00000378821 COX11Q9Y6N1 276 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms