RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CCL24O00175 119 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 GCSHP23434 173 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 AMMECR1LQ6DCA0 310 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 TEX29Q8N6K0 151 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 CHAC1Q9BUX1 264 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 SEC11AP67812 179 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 LINC01587Q99440 93 aa14.09□□□□□ -0.15
PCDHA4-201ENST00000378125 SMR3AQ99954 134 aa14.08□□□□□ -0.16
PCDHA4-201ENST00000378125 TRBV27A0A0K0K1C4 114 aa14.08□□□□□ -0.16
PCDHA4-201ENST00000378125 OPRPNQ99935 248 aaPredicted RBP14.08□□□□□ -0.16
PCDHA4-201ENST00000378125 FASNP49327 2511 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 LINC01006Q8NI28 216 aa14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 XCL2Q9UBD3 114 aa14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 IGHV3OR16-12A0A075B7B8 117 aa14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 IGIPA6NJ69 53 aa14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 RPL32P62910 135 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 TRPT1Q86TN4 253 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-201ENST00000378125 TRAV2A0A0B4J234 112 aa14.06□□□□□ -0.16
PCDHA4-201ENST00000378125 ODF3L2Q3SX64 289 aa14.06□□□□□ -0.16
PCDHA4-201ENST00000378125 Q9UF83 564 aa14.06□□□□□ -0.16
PCDHA4-201ENST00000378125 TRBV6-5A0A0K0K1A5 114 aa14.06□□□□□ -0.16
PCDHA4-201ENST00000378125 A6NDN8 102 aa14.06□□□□□ -0.16
PCDHA4-201ENST00000378125 FXYD2P54710 66 aa14.06□□□□□ -0.16
PCDHA4-201ENST00000378125 A8MTW9 85 aa14.05□□□□□ -0.16
PCDHA4-201ENST00000378125 SPAG8Q99932 426 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-201ENST00000378125 GCN1Q92616 2671 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-201ENST00000378125 FHL3Q13643 280 aa14.04□□□□□ -0.16
PCDHA4-201ENST00000378125 OR4C5Q8NGB2 326 aa14.04□□□□□ -0.16
PCDHA4-201ENST00000378125 OR11H12B2RN74 326 aa14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 MRPL16Q9NX20 251 aaKnown RBP14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 C11orf86A6NJI1 115 aa14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 H3BUT2 72 aa14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 Q6ZSN1 163 aa14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 HIGD1BQ9P298 99 aa14.03□□□□□ -0.16
PCDHA4-201ENST00000378125 HECTD1Q9ULT8 2610 aa14.02□□□□□ -0.16
PCDHA4-201ENST00000378125 IGLV4-69A0A075B6H9 119 aa14.02□□□□□ -0.16
PCDHA4-201ENST00000378125 STHQ8IWL8 128 aa14.02□□□□□ -0.16
PCDHA4-201ENST00000378125 CST9LQ9H4G1 147 aa14.02□□□□□ -0.16
PCDHA4-201ENST00000378125 SETXQ7Z333 2677 aaKnown RBP14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 K7ERJ3 54 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 M0R2P5 195 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 AZU1P20160 251 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 RIPPLY3P57055 190 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 ZNF415Q09FC8 603 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 PMVKQ15126 192 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 JMJD8Q96S16 334 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 PRADC1Q9BSG0 188 aa14.02□□□□□ -0.17
PCDHA4-201ENST00000378125 INSP01308 110 aa14.01□□□□□ -0.17
PCDHA4-201ENST00000378125 TSSC4Q9Y5U2 329 aaPredicted RBP14.01□□□□□ -0.17
PCDHA4-201ENST00000378125 JMJD1CQ15652 2540 aa14.01□□□□□ -0.17
PCDHA4-201ENST00000378125 H3BRM9 83 aa14.01□□□□□ -0.17
PCDHA4-201ENST00000378125 I3L3M4 83 aa14.01□□□□□ -0.17
PCDHA4-201ENST00000378125 SAP30O75446 220 aa14□□□□□ -0.17
PCDHA4-201ENST00000378125 RNASE1P07998 156 aaKnown RBP14□□□□□ -0.17
PCDHA4-201ENST00000378125 NSUN5P1Q3KNT7 163 aa14□□□□□ -0.17
PCDHA4-201ENST00000378125 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
PCDHA4-201ENST00000378125 TMEM141Q96I45 108 aa13.99□□□□□ -0.17
PCDHA4-201ENST00000378125 NOTCH3Q9UM47 2321 aa13.99□□□□□ -0.17
PCDHA4-201ENST00000378125 NACAE9PAV3 2078 aa13.99□□□□□ -0.17
PCDHA4-201ENST00000378125 MYMXA0A1B0GTQ4 84 aa13.99□□□□□ -0.17
PCDHA4-201ENST00000378125 TIMM17AQ99595 171 aa13.99□□□□□ -0.17
PCDHA4-201ENST00000378125 C9orf118A6NHY6 69 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 CFAP126Q5VTH2 177 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 CEND1Q8N111 149 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 HIST1H4GQ99525 98 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 WFDC10AQ9H1F0 79 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 NHP2Q9NX24 153 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 E9PLD3 99 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 TMEM170BQ5T4T1 132 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
PCDHA4-201ENST00000378125 C20orf203Q8NBC4 194 aa13.97□□□□□ -0.17
PCDHA4-201ENST00000378125 TNFRSF18Q9Y5U5 241 aa13.97□□□□□ -0.17
PCDHA4-201ENST00000378125 A8MWV9 139 aa13.97□□□□□ -0.17
PCDHA4-201ENST00000378125 SMIM13P0DJ93 91 aa13.97□□□□□ -0.17
PCDHA4-201ENST00000378125 UFSP1Q6NVU6 142 aa13.97□□□□□ -0.17
PCDHA4-201ENST00000378125 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
PCDHA4-201ENST00000378125 SCGB2A2Q13296 93 aa13.96□□□□□ -0.17
PCDHA4-201ENST00000378125 RHOHQ15669 191 aa13.96□□□□□ -0.17
PCDHA4-201ENST00000378125 CEMP1Q6PRD7 247 aaPredicted RBP13.96□□□□□ -0.17
PCDHA4-201ENST00000378125 C1orf158Q8N1D5 194 aa13.96□□□□□ -0.17
PCDHA4-201ENST00000378125 TRAV25A0A0B4J276 109 aa13.96□□□□□ -0.18
PCDHA4-201ENST00000378125 IGHV3-38A0A0C4DH36 116 aa13.96□□□□□ -0.18
PCDHA4-201ENST00000378125 PLEKHB2Q96CS7 222 aa13.96□□□□□ -0.18
PCDHA4-201ENST00000378125 ZNF418Q8TF45 676 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-201ENST00000378125 C16orf95Q9H693 158 aa13.95□□□□□ -0.18
PCDHA4-201ENST00000378125 NOTCH2Q04721 2471 aa13.95□□□□□ -0.18
PCDHA4-201ENST00000378125 PHLDA1Q8WV24 401 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-201ENST00000378125 GAGE10A6NGK3 116 aa13.94□□□□□ -0.18
PCDHA4-201ENST00000378125 RNASE13Q5GAN3 156 aaKnown RBP13.94□□□□□ -0.18
PCDHA4-201ENST00000378125 HIVEP2P31629 2446 aa13.94□□□□□ -0.18
PCDHA4-201ENST00000378125 LINC01549A6NIU2 74 aa13.93□□□□□ -0.18
PCDHA4-201ENST00000378125 SCGB1D4Q6XE38 83 aa13.93□□□□□ -0.18
PCDHA4-201ENST00000378125 TM2D2Q9BX73 214 aa13.93□□□□□ -0.18
PCDHA4-201ENST00000378125 IGHV3-64A0A075B6Q5 118 aa13.92□□□□□ -0.18
PCDHA4-201ENST00000378125 HILS1P60008 231 aa13.92□□□□□ -0.18
PCDHA4-201ENST00000378125 TRGV1A0A0A0MS02 117 aa13.92□□□□□ -0.18
PCDHA4-201ENST00000378125 TSPEAR-AS2P59090 65 aa13.92□□□□□ -0.18
PCDHA4-201ENST00000378125 IGLV4-3A0A075B6K6 122 aa13.91□□□□□ -0.18
PCDHA4-201ENST00000378125 RPL35AP18077 110 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms