RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 RAX2Q96IS3 184 aa9.62□□□□□ -0.87
USP11-204ENST00000377107 SPXQ9BT56 116 aa9.62□□□□□ -0.87
USP11-204ENST00000377107 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 KLLNB2CW77 178 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 TM2D2Q9BX73 214 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 USP24Q9UPU5 2620 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 KRTAP10-9P60411 292 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 VCX2Q9H322 139 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 LINC01546A6NGU7 62 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 SMAGPQ0VAQ4 97 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 LINC01587Q99440 93 aa9.61□□□□□ -0.87
USP11-204ENST00000377107 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
USP11-204ENST00000377107 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 E9PLD3 99 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 TSHBP01222 138 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 A6NJY4 79 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 ATP6V0BQ99437 205 aa9.6□□□□□ -0.87
USP11-204ENST00000377107 CRYGDP07320 174 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 FLNAP21333 2647 aaKnown RBP9.59□□□□□ -0.87
USP11-204ENST00000377107 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 A0A0U1RRA0 63 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 K7EMT4 169 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 CD28P10747 220 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 LINC00315P59091 139 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 XCL2Q9UBD3 114 aa9.59□□□□□ -0.87
USP11-204ENST00000377107 G3V4G9 280 aa9.59□□□□□ -0.88
USP11-204ENST00000377107 K7EQG2 157 aa9.59□□□□□ -0.88
USP11-204ENST00000377107 KLK9Q2XQG4 91 aa9.59□□□□□ -0.88
USP11-204ENST00000377107 Q9UF83 564 aa9.59□□□□□ -0.88
USP11-204ENST00000377107 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.88
USP11-204ENST00000377107 TSSC4Q9Y5U2 329 aaPredicted RBP9.59□□□□□ -0.88
USP11-204ENST00000377107 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
USP11-204ENST00000377107 ZNF580Q9UK33 172 aa9.58□□□□□ -0.88
USP11-204ENST00000377107 KIF25-AS1Q9Y6Z4 181 aa9.58□□□□□ -0.88
USP11-204ENST00000377107 IGHV3-53P01767 116 aa9.58□□□□□ -0.88
USP11-204ENST00000377107 POLR2KP53803 58 aaKnown RBP9.58□□□□□ -0.88
USP11-204ENST00000377107 PTH2Q96A98 100 aa9.58□□□□□ -0.88
USP11-204ENST00000377107 TRBV7-3A0A075B6L6 115 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 J3QQQ9 107 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 INSL3P51460 131 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 J3QR89 54 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 FAM19A4Q96LR4 140 aa9.57□□□□□ -0.88
USP11-204ENST00000377107 M0QY20 66 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
USP11-204ENST00000377107 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
USP11-204ENST00000377107 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
USP11-204ENST00000377107 Q5PR19 223 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 Q96MF0 132 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 MED14OSP0DP75 135 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 HIST2H2BCQ6DN03 193 aa9.56□□□□□ -0.88
USP11-204ENST00000377107 CFHR3Q02985 330 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 TAL2Q16559 108 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 A8MZ25 164 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 I3L3M4 83 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 GATA3P23771 443 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
USP11-204ENST00000377107 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
USP11-204ENST00000377107 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
USP11-204ENST00000377107 DSCR9P59020 149 aa9.54□□□□□ -0.88
USP11-204ENST00000377107 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
USP11-204ENST00000377107 TMEM141Q96I45 108 aa9.54□□□□□ -0.88
USP11-204ENST00000377107 SPAG8Q99932 426 aaPredicted RBP9.54□□□□□ -0.88
USP11-204ENST00000377107 ITPR3Q14573 2671 aa9.54□□□□□ -0.88
USP11-204ENST00000377107 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
USP11-204ENST00000377107 MORN3Q6PF18 240 aaPredicted RBP9.53□□□□□ -0.88
USP11-204ENST00000377107 ZNF625Q96I27 306 aaPredicted RBP9.53□□□□□ -0.88
USP11-204ENST00000377107 A0A0J9YY99 117 aa9.53□□□□□ -0.88
USP11-204ENST00000377107 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
USP11-204ENST00000377107 ZNF702PQ9H963 129 aa9.53□□□□□ -0.88
USP11-204ENST00000377107 NIPBLQ6KC79 2804 aaeCLIP9.53□□□□□ -0.88
USP11-204ENST00000377107 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.88
USP11-204ENST00000377107 TSPAN13O95857 204 aa9.52□□□□□ -0.88
USP11-204ENST00000377107 ELANEP08246 267 aa9.52□□□□□ -0.88
USP11-204ENST00000377107 C9orf85Q96MD7 179 aa9.52□□□□□ -0.88
USP11-204ENST00000377107 F8W1H4 67 aa9.52□□□□□ -0.89
USP11-204ENST00000377107 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
USP11-204ENST00000377107 A4D1N5 150 aa9.52□□□□□ -0.89
USP11-204ENST00000377107 LGALS9O00182 355 aa9.52□□□□□ -0.89
USP11-204ENST00000377107 C20orf203Q8NBC4 194 aa9.52□□□□□ -0.89
USP11-204ENST00000377107 BBC3Q96PG8 261 aaPredicted RBP9.52□□□□□ -0.89
USP11-204ENST00000377107 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 SPINK8P0C7L1 97 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 AZU1P20160 251 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
USP11-204ENST00000377107 TRGV1A0A0A0MS02 117 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 TIMM17AQ99595 171 aa9.51□□□□□ -0.89
USP11-204ENST00000377107 SPANXB1Q9NS25 103 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms