RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
HLA-A-201ENST00000376802 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
HLA-A-201ENST00000376802 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
HLA-A-201ENST00000376802 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.6
HLA-A-201ENST00000376802 MUC21A0A0G2JKD1 596 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 MUC21A0A140T8X8 626 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 KANTRA0A1W2PQU2 76 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 SNAI2O43623 268 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.61
HLA-A-201ENST00000376802 CXCL1P09341 107 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 ZNF56Q15929 161 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 STOML3Q8TAV4 291 aa11.27□□□□□ -0.61
HLA-A-201ENST00000376802 PKHD1L1Q86WI1 4243 aa11.26□□□□□ -0.61
HLA-A-201ENST00000376802 PRSS1P07477 247 aa11.26□□□□□ -0.61
HLA-A-201ENST00000376802 KRTAP26-1Q6PEX3 210 aa11.26□□□□□ -0.61
HLA-A-201ENST00000376802 SLC51BQ86UW2 128 aa11.26□□□□□ -0.61
HLA-A-201ENST00000376802 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
HLA-A-201ENST00000376802 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
HLA-A-201ENST00000376802 CRPP02741 224 aa11.25□□□□□ -0.61
HLA-A-201ENST00000376802 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
HLA-A-201ENST00000376802 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
HLA-A-201ENST00000376802 VAX2Q9UIW0 290 aa11.25□□□□□ -0.61
HLA-A-201ENST00000376802 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
HLA-A-201ENST00000376802 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
HLA-A-201ENST00000376802 HLA-DQA1P01909 254 aa11.24□□□□□ -0.61
HLA-A-201ENST00000376802 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
HLA-A-201ENST00000376802 OR5AL1P0C617 328 aa11.24□□□□□ -0.61
HLA-A-201ENST00000376802 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
HLA-A-201ENST00000376802 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
HLA-A-201ENST00000376802 MIAQ16674 131 aa11.24□□□□□ -0.61
HLA-A-201ENST00000376802 SFT2D1Q8WV19 159 aa11.24□□□□□ -0.61
HLA-A-201ENST00000376802 RBX1P62877 108 aa11.23□□□□□ -0.61
HLA-A-201ENST00000376802 SPANXN1Q5VSR9 72 aa11.23□□□□□ -0.61
HLA-A-201ENST00000376802 DGAT2L7PQ6IED9 249 aa11.23□□□□□ -0.61
HLA-A-201ENST00000376802 BAGE2Q86Y30 109 aa11.23□□□□□ -0.61
HLA-A-201ENST00000376802 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
HLA-A-201ENST00000376802 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
HLA-A-201ENST00000376802 A0A1B0GV50 99 aa11.22□□□□□ -0.61
HLA-A-201ENST00000376802 F5H697 171 aa11.22□□□□□ -0.61
HLA-A-201ENST00000376802 PANO1I0J062 215 aa11.22□□□□□ -0.61
HLA-A-201ENST00000376802 SSTP61278 116 aa11.22□□□□□ -0.61
HLA-A-201ENST00000376802 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
HLA-A-201ENST00000376802 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.22□□□□□ -0.61
HLA-A-201ENST00000376802 PKIAP61925 76 aa11.21□□□□□ -0.61
HLA-A-201ENST00000376802 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.61
HLA-A-201ENST00000376802 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.21□□□□□ -0.61
HLA-A-201ENST00000376802 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
HLA-A-201ENST00000376802 DERL1Q9BUN8 251 aa11.21□□□□□ -0.61
HLA-A-201ENST00000376802 IFITM2Q01629 132 aa11.2□□□□□ -0.62
HLA-A-201ENST00000376802 GAGE6Q13070 117 aa11.2□□□□□ -0.62
HLA-A-201ENST00000376802 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
HLA-A-201ENST00000376802 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
HLA-A-201ENST00000376802 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
HLA-A-201ENST00000376802 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
HLA-A-201ENST00000376802 UBR4Q5T4S7 5183 aa11.19□□□□□ -0.62
HLA-A-201ENST00000376802 UMAD1C9J7I0 102 aa11.19□□□□□ -0.62
HLA-A-201ENST00000376802 M0QY20 66 aa11.18□□□□□ -0.62
HLA-A-201ENST00000376802 IQCJQ1A5X6 159 aa11.18□□□□□ -0.62
HLA-A-201ENST00000376802 EIF5AL1Q6IS14 154 aaKnown RBP11.18□□□□□ -0.62
HLA-A-201ENST00000376802 TRBV25-1A0A075B6N4 114 aa11.17□□□□□ -0.62
HLA-A-201ENST00000376802 AP1S3Q96PC3 154 aa11.17□□□□□ -0.62
HLA-A-201ENST00000376802 SMIM17P0DL12 118 aa11.16□□□□□ -0.62
HLA-A-201ENST00000376802 RPL35P42766 123 aaKnown RBP11.16□□□□□ -0.62
HLA-A-201ENST00000376802 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 IGLC6P0CF74 106 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 GZMBP10144 247 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 REG3AQ06141 175 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
HLA-A-201ENST00000376802 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
HLA-A-201ENST00000376802 CCL20P78556 96 aa11.14□□□□□ -0.63
HLA-A-201ENST00000376802 CIRBPQ14011 172 aaKnown RBP11.14□□□□□ -0.63
HLA-A-201ENST00000376802 CLRN3Q8NCR9 226 aa11.14□□□□□ -0.63
HLA-A-201ENST00000376802 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
HLA-A-201ENST00000376802 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
HLA-A-201ENST00000376802 SLPIP03973 132 aa11.13□□□□□ -0.63
HLA-A-201ENST00000376802 MT1HL1P0DM35 61 aa11.13□□□□□ -0.63
HLA-A-201ENST00000376802 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
HLA-A-201ENST00000376802 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
HLA-A-201ENST00000376802 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
HLA-A-201ENST00000376802 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
HLA-A-201ENST00000376802 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
HLA-A-201ENST00000376802 MGPP08493 103 aa11.12□□□□□ -0.63
HLA-A-201ENST00000376802 ALKAL2Q6UX46 152 aa11.12□□□□□ -0.63
HLA-A-201ENST00000376802 RAB5CP51148 216 aa11.11□□□□□ -0.63
HLA-A-201ENST00000376802 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
HLA-A-201ENST00000376802 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
HLA-A-201ENST00000376802 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
HLA-A-201ENST00000376802 hDV102S1A0JD36 115 aa11.1□□□□□ -0.63
HLA-A-201ENST00000376802 P01737 135 aa11.1□□□□□ -0.63
HLA-A-201ENST00000376802 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
HLA-A-201ENST00000376802 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
HLA-A-201ENST00000376802 GNG13Q9P2W3 67 aa11.1□□□□□ -0.63
HLA-A-201ENST00000376802 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 H7C1H1 209 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 SULT1A2P50226 295 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 RASL11AQ6T310 242 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
HLA-A-201ENST00000376802 MANBALQ9NQG1 85 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms