RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DEFB113Q30KQ7 82 aa8.8□□□□□ -1
DDR1-227ENST00000376570 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
DDR1-227ENST00000376570 MXRA5Q9NR99 2828 aa8.8□□□□□ -1
DDR1-227ENST00000376570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.79□□□□□ -1
DDR1-227ENST00000376570 IGKV2-29A2NJV5 120 aaPredicted RBP8.79□□□□□ -1
DDR1-227ENST00000376570 TMEM262E9PQX1 116 aa8.79□□□□□ -1
DDR1-227ENST00000376570 EBI3Q14213 229 aa8.79□□□□□ -1
DDR1-227ENST00000376570 DLX4Q92988 240 aaPredicted RBP8.79□□□□□ -1
DDR1-227ENST00000376570 VCX2Q9H322 139 aa8.79□□□□□ -1
DDR1-227ENST00000376570 GATD1Q8NB37 220 aa8.79□□□□□ -1
DDR1-227ENST00000376570 GAGE12HA6NDE8 117 aa8.79□□□□□ -1
DDR1-227ENST00000376570 FGF6P10767 208 aa8.79□□□□□ -1
DDR1-227ENST00000376570 CKS1BP61024 79 aa8.78□□□□□ -1
DDR1-227ENST00000376570 Q8N8P6 123 aa8.78□□□□□ -1
DDR1-227ENST00000376570 RNF185Q96GF1 192 aa8.78□□□□□ -1
DDR1-227ENST00000376570 UNC79Q9P2D8 2635 aa8.78□□□□□ -1
DDR1-227ENST00000376570 GAGE12JA6NER3 117 aa8.78□□□□□ -1
DDR1-227ENST00000376570 HERVK_113P61574 105 aa8.78□□□□□ -1
DDR1-227ENST00000376570 GAGE4Q13068 117 aa8.78□□□□□ -1
DDR1-227ENST00000376570 GAGE5Q13069 117 aa8.78□□□□□ -1
DDR1-227ENST00000376570 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
DDR1-227ENST00000376570 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
DDR1-227ENST00000376570 C12orf74Q32Q52 190 aa8.78□□□□□ -1
DDR1-227ENST00000376570 SUMO4Q6EEV6 95 aa8.78□□□□□ -1
DDR1-227ENST00000376570 IGHV1OR15-1A0A075B7D0 117 aa8.77□□□□□ -1
DDR1-227ENST00000376570 GAGE7O76087 117 aa8.77□□□□□ -1
DDR1-227ENST00000376570 GAGE12FP0CL80 117 aa8.77□□□□□ -1
DDR1-227ENST00000376570 GAGE12GP0CL81 117 aa8.77□□□□□ -1
DDR1-227ENST00000376570 GAGE12IP0CL82 117 aa8.77□□□□□ -1
DDR1-227ENST00000376570 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1
DDR1-227ENST00000376570 INSL3P51460 131 aa8.77□□□□□ -1.01
DDR1-227ENST00000376570 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
DDR1-227ENST00000376570 CEND1Q8N111 149 aa8.77□□□□□ -1.01
DDR1-227ENST00000376570 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
DDR1-227ENST00000376570 IGLC6P0CF74 106 aa8.77□□□□□ -1.01
DDR1-227ENST00000376570 CITED2Q99967 270 aaPredicted RBP8.77□□□□□ -1.01
DDR1-227ENST00000376570 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
DDR1-227ENST00000376570 G3V4G9 280 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 ODF1Q14990 250 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 ZNF48Q96MX3 618 aaPredicted RBP8.76□□□□□ -1.01
DDR1-227ENST00000376570 BSNQ9UPA5 3926 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 TMEM238LA0A1B0GVL6 79 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 A6NJY4 79 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 IGHV4-31P0DP07 118 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 ORMDL2Q53FV1 153 aa8.76□□□□□ -1.01
DDR1-227ENST00000376570 A0A096LNJ9 63 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 LINC01619G3V211 115 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 DAND5Q8N907 189 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 IGLL5B9A064 214 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 PLA2G2AP14555 144 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 PEMTQ9UBM1 199 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 C20orf78Q9BR46 151 aa8.75□□□□□ -1.01
DDR1-227ENST00000376570 RASL10AQ92737 203 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 H7C1H1 209 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 C9orf47Q6ZRZ4 202 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 A8MZ25 164 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 LGALS1P09382 135 aaKnown RBP8.74□□□□□ -1.01
DDR1-227ENST00000376570 DSCR9P59020 149 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 MEIG1Q5JSS6 88 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
DDR1-227ENST00000376570 NOP10Q9NPE3 64 aaKnown RBP8.73□□□□□ -1.01
DDR1-227ENST00000376570 APCP25054 2843 aa8.73□□□□□ -1.01
DDR1-227ENST00000376570 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
DDR1-227ENST00000376570 VCYO14598 125 aa8.73□□□□□ -1.01
DDR1-227ENST00000376570 Q9UF83 564 aa8.73□□□□□ -1.01
DDR1-227ENST00000376570 U3KQE9 123 aa8.72□□□□□ -1.01
DDR1-227ENST00000376570 UBE2L6O14933 153 aa8.72□□□□□ -1.01
DDR1-227ENST00000376570 GPHB5Q86YW7 130 aa8.72□□□□□ -1.01
DDR1-227ENST00000376570 CCL24O00175 119 aa8.72□□□□□ -1.01
DDR1-227ENST00000376570 SPAG8Q99932 426 aaPredicted RBP8.72□□□□□ -1.01
DDR1-227ENST00000376570 C9JAW5 83 aa8.71□□□□□ -1.01
DDR1-227ENST00000376570 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.01
DDR1-227ENST00000376570 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.01
DDR1-227ENST00000376570 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.02
DDR1-227ENST00000376570 RNASE1P07998 156 aaKnown RBP8.71□□□□□ -1.02
DDR1-227ENST00000376570 PLNP26678 52 aa8.71□□□□□ -1.02
DDR1-227ENST00000376570 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
DDR1-227ENST00000376570 STAB1Q9NY15 2570 aa8.71□□□□□ -1.02
DDR1-227ENST00000376570 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.02
DDR1-227ENST00000376570 A0A0J9YX75 114 aa8.7□□□□□ -1.02
DDR1-227ENST00000376570 DNAJC9-AS1A6NH13 148 aa8.7□□□□□ -1.02
DDR1-227ENST00000376570 F8VRH5 84 aa8.7□□□□□ -1.02
DDR1-227ENST00000376570 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
DDR1-227ENST00000376570 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
DDR1-227ENST00000376570 A0A087WX48 190 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 J3QKU1 62 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 ANAPC13Q9BS18 74 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 A0A0J9YY99 117 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 A8MWV9 139 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 GATA3P23771 443 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 LYRM7Q5U5X0 104 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 ZNF493Q6ZR52 646 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 COL6A5A8TX70 2615 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 VPS13CQ709C8 3753 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 TRGV11A0A075B6L2 103 aa8.69□□□□□ -1.02
DDR1-227ENST00000376570 PSMB8P28062 276 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms